RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 HMGCS2P54868 508 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 CASP7P55210 303 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 TLE2Q04725 743 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 MTMR3Q13615 1198 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 UBE4AQ14139 1066 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 AAK1Q2M2I8 961 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 CCDC57Q2TAC2 916 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 MFSD14CQ5VZR4 134 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 HHIPL2Q6UWX4 724 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 GPRC5AQ8NFJ5 357 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 LPAR1Q92633 364 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 DAGLAQ9Y4D2 1042 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 USP3Q9Y6I4 520 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 USP34Q70CQ2 3546 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 DOCK3Q8IZD9 2030 aa9.09□□□□□ -0.95
TCF4-221ENST00000563888 KBTBD13C9JR72 458 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 SPINT1O43278 529 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 CTNND1O60716 968 aaKnown RBP9.08□□□□□ -0.96
TCF4-221ENST00000563888 RAG1P15918 1043 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 ADCYAP1R1P41586 468 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 FOXO4P98177 505 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 FPGSQ05932 587 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 CCDC30Q5VVM6 783 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 ANO1Q5XXA6 986 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 LMBR1LQ6UX01 489 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 FBXO33Q7Z6M2 555 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 C8orf58Q8NAV2 365 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 PBX4Q9BYU1 374 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
TCF4-221ENST00000563888 MAST3O60307 1309 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 TRANK1O15050 2925 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 MAPK4P31152 587 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 ZEB1P37275 1124 aaPredicted RBP9.07□□□□□ -0.96
TCF4-221ENST00000563888 RGS3P49796 1198 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 IRX3P78415 501 aaPredicted RBP9.07□□□□□ -0.96
TCF4-221ENST00000563888 ATP2B2Q01814 1243 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 NHLH1Q02575 133 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 CAVIN4Q5BKX8 364 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 FOXD4L5Q5VV16 416 aaPredicted RBP9.07□□□□□ -0.96
TCF4-221ENST00000563888 GPR142Q7Z601 462 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 PLEKHH3Q7Z736 793 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 ALDH16A1Q8IZ83 802 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 ARRDC4Q8NCT1 418 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 FOXD4L4Q8WXT5 416 aaPredicted RBP9.07□□□□□ -0.96
TCF4-221ENST00000563888 USP6NLQ92738 828 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 EDC3Q96F86 508 aaKnown RBP9.07□□□□□ -0.96
TCF4-221ENST00000563888 APBA2Q99767 749 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 PUS3Q9BZE2 481 aaKnown RBP9.07□□□□□ -0.96
TCF4-221ENST00000563888 PORCNQ9H237 461 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 TXNRD2Q9NNW7 524 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 FLRT1Q9NZU1 646 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 MORF4L1Q9UBU8 362 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 TACC3Q9Y6A5 838 aa9.07□□□□□ -0.96
TCF4-221ENST00000563888 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
TCF4-221ENST00000563888 EML1O00423 815 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 MSCO60682 206 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 PQBP1O60828 265 aaKnown RBP9.06□□□□□ -0.96
TCF4-221ENST00000563888 CLTBP09497 229 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 ERCC3P19447 782 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 CYP2C19P33261 490 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 CTSOP43234 321 aaPredicted RBP9.06□□□□□ -0.96
TCF4-221ENST00000563888 COX20Q5RI15 118 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 WDR78Q5VTH9 848 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 MRPL14Q6P1L8 145 aaKnown RBP9.06□□□□□ -0.96
TCF4-221ENST00000563888 G2E3Q7L622 706 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 ZNF280CQ8ND82 737 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 PAGR1Q9BTK6 254 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 SAP130Q9H0E3 1048 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 MYH16Q9H6N6 1097 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 TMEM39AQ9NV64 488 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 STIM2Q9P246 746 aa9.06□□□□□ -0.96
TCF4-221ENST00000563888 WDR87Q6ZQQ6 2873 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 BRD2P25440 801 aaKnown RBP9.05□□□□□ -0.96
TCF4-221ENST00000563888 MAPK1P28482 360 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 PHKA2P46019 1235 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 PLA2G4AP47712 749 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 HERVK_113P62684 666 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 EPHA10Q5JZY3 1008 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 ALKBH2Q6NS38 261 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 PRICKLE2Q7Z3G6 844 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 TRPV1Q8NER1 839 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.05□□□□□ -0.96
TCF4-221ENST00000563888 PHACTR1Q9C0D0 580 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 NKX2-4Q9H2Z4 354 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 RBPJLQ9UBG7 517 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 MSRAQ9UJ68 235 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
TCF4-221ENST00000563888 ZFHX2Q9C0A1 2572 aaPredicted RBP9.05□□□□□ -0.96
TCF4-221ENST00000563888 ATRNL1Q5VV63 1379 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 DDTLA6NHG4 134 aaPredicted RBP9.04□□□□□ -0.96
TCF4-221ENST00000563888 ERC2O15083 957 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 PICALMQ13492 652 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 SNX17Q15036 470 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 RTN1Q16799 776 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 C11orf91Q3C1V1 193 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 C4orf17Q53FE4 359 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 SH3PXD2AQ5TCZ1 1133 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 LYSMD3Q7Z3D4 306 aa9.04□□□□□ -0.96
TCF4-221ENST00000563888 MYO19Q96H55 970 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms