RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 ACLYP53396 1101 aa29.58■■■□□ 2.33
SPG7-208ENST00000563783 WDR19Q8NEZ3 1342 aa29.58■■■□□ 2.33
SPG7-208ENST00000563783 MORC4Q8TE76 937 aa29.58■■■□□ 2.33
SPG7-208ENST00000563783 RAD50Q92878 1312 aa29.58■■■□□ 2.33
SPG7-208ENST00000563783 ELP1O95163 1332 aa29.57■■■□□ 2.32
SPG7-208ENST00000563783 SOWAHBA6NEL2 793 aa29.57■■■□□ 2.32
SPG7-208ENST00000563783 IMMTQ16891 758 aaKnown RBP29.57■■■□□ 2.32
SPG7-208ENST00000563783 ANKRD33Q7Z3H0 272 aa29.57■■■□□ 2.32
SPG7-208ENST00000563783 LENG1Q96BZ8 264 aaPredicted RBP29.57■■■□□ 2.32
SPG7-208ENST00000563783 TLE2Q04725 743 aa29.56■■■□□ 2.32
SPG7-208ENST00000563783 MUM1L1Q5H9M0 696 aa29.56■■■□□ 2.32
SPG7-208ENST00000563783 TTC22Q5TAA0 569 aa29.56■■■□□ 2.32
SPG7-208ENST00000563783 TTBK2Q6IQ55 1244 aa29.56■■■□□ 2.32
SPG7-208ENST00000563783 LRCH3Q96II8 777 aa29.56■■■□□ 2.32
SPG7-208ENST00000563783 CNNM2Q9H8M5 875 aa29.56■■■□□ 2.32
SPG7-208ENST00000563783 ADD3Q9UEY8 706 aaKnown RBP29.56■■■□□ 2.32
SPG7-208ENST00000563783 MTMR7Q9Y216 660 aa29.56■■■□□ 2.32
SPG7-208ENST00000563783 MROH7Q68CQ1 1323 aa29.55■■■□□ 2.32
SPG7-208ENST00000563783 STARD7Q9NQZ5 370 aa29.55■■■□□ 2.32
SPG7-208ENST00000563783 MYH6P13533 1939 aa29.54■■■□□ 2.32
SPG7-208ENST00000563783 ADCY6O43306 1168 aa29.54■■■□□ 2.32
SPG7-208ENST00000563783 CLTBP09497 229 aa29.54■■■□□ 2.32
SPG7-208ENST00000563783 SLC16A2P36021 539 aa29.54■■■□□ 2.32
SPG7-208ENST00000563783 KCNA10Q16322 511 aa29.54■■■□□ 2.32
SPG7-208ENST00000563783 KRT23Q9C075 422 aa29.54■■■□□ 2.32
SPG7-208ENST00000563783 ASTN1O14525 1302 aa29.53■■■□□ 2.32
SPG7-208ENST00000563783 KIAA0355O15063 1070 aa29.53■■■□□ 2.32
SPG7-208ENST00000563783 C6orf222P0C671 652 aaPredicted RBP29.53■■■□□ 2.32
SPG7-208ENST00000563783 CHMP4CQ96CF2 233 aa29.53■■■□□ 2.32
SPG7-208ENST00000563783 GLT1D1Q96MS3 346 aa29.53■■■□□ 2.32
SPG7-208ENST00000563783 VTA1Q9NP79 307 aa29.53■■■□□ 2.32
SPG7-208ENST00000563783 GPCPD1Q9NPB8 672 aa29.53■■■□□ 2.32
SPG7-208ENST00000563783 Q9Y3F1 56 aa29.53■■■□□ 2.32
SPG7-208ENST00000563783 FRMPD2Q68DX3 1309 aaPredicted RBP29.52■■■□□ 2.32
SPG7-208ENST00000563783 KDM4AO75164 1064 aa29.52■■■□□ 2.32
SPG7-208ENST00000563783 PDE4AP27815 886 aa29.52■■■□□ 2.32
SPG7-208ENST00000563783 SNAP25P60880 206 aa29.52■■■□□ 2.32
SPG7-208ENST00000563783 TNFAIP2Q03169 654 aa29.52■■■□□ 2.32
SPG7-208ENST00000563783 NSMFQ6X4W1 530 aa29.52■■■□□ 2.32
SPG7-208ENST00000563783 SEZ6LQ9BYH1 1024 aa29.52■■■□□ 2.32
SPG7-208ENST00000563783 PRDM5Q9NQX1 630 aaPredicted RBP29.52■■■□□ 2.32
SPG7-208ENST00000563783 IQSEC1Q6DN90 963 aa29.51■■■□□ 2.31
SPG7-208ENST00000563783 PNMA1Q8ND90 353 aa29.51■■■□□ 2.31
SPG7-208ENST00000563783 RUFY2Q8WXA3 655 aa29.51■■■□□ 2.31
SPG7-208ENST00000563783 ZSCAN10Q96SZ4 725 aaPredicted RBP29.51■■■□□ 2.31
SPG7-208ENST00000563783 GNEQ9Y223 722 aaKnown RBP29.51■■■□□ 2.31
SPG7-208ENST00000563783 TRIM43BA6NCK2 446 aa29.5■■■□□ 2.31
SPG7-208ENST00000563783 DCDC2CA8MYV0 355 aa29.5■■■□□ 2.31
SPG7-208ENST00000563783 GSPT1P15170 499 aaKnown RBP29.5■■■□□ 2.31
SPG7-208ENST00000563783 ASPRV1Q53RT3 343 aa29.5■■■□□ 2.31
SPG7-208ENST00000563783 RGS22Q8NE09 1264 aa29.5■■■□□ 2.31
SPG7-208ENST00000563783 TRIM43Q96BQ3 446 aaPredicted RBP29.5■■■□□ 2.31
SPG7-208ENST00000563783 KAT14Q9H8E8 782 aa29.5■■■□□ 2.31
SPG7-208ENST00000563783 MYADML2A6NDP7 307 aa29.49■■■□□ 2.31
SPG7-208ENST00000563783 CTAGE5O15320 804 aa29.49■■■□□ 2.31
SPG7-208ENST00000563783 CABYRO75952 493 aa29.49■■■□□ 2.31
SPG7-208ENST00000563783 ASGR1P07306 291 aa29.49■■■□□ 2.31
SPG7-208ENST00000563783 GNASQ5JWF2 1037 aa29.49■■■□□ 2.31
SPG7-208ENST00000563783 ZSWIM5Q9P217 1185 aa29.49■■■□□ 2.31
SPG7-208ENST00000563783 B4E1Z4 1266 aa29.48■■■□□ 2.31
SPG7-208ENST00000563783 NFIBO00712 420 aa29.48■■■□□ 2.31
SPG7-208ENST00000563783 CDK7P50613 346 aa29.48■■■□□ 2.31
SPG7-208ENST00000563783 BAATQ14032 418 aaPredicted RBP29.48■■■□□ 2.31
SPG7-208ENST00000563783 FAM109BQ6ICB4 259 aaPredicted RBP29.48■■■□□ 2.31
SPG7-208ENST00000563783 SH3RF1Q7Z6J0 888 aa29.48■■■□□ 2.31
SPG7-208ENST00000563783 ENAHQ8N8S7 591 aaPredicted RBP29.48■■■□□ 2.31
SPG7-208ENST00000563783 CLEC4DQ8WXI8 215 aa29.48■■■□□ 2.31
SPG7-208ENST00000563783 BADQ92934 168 aa29.48■■■□□ 2.31
SPG7-208ENST00000563783 MPHOSPH6Q99547 160 aaKnown RBP29.48■■■□□ 2.31
SPG7-208ENST00000563783 LAMA2P24043 3122 aaKnown RBP29.48■■■□□ 2.31
SPG7-208ENST00000563783 A0A0U1RQG5 324 aaPredicted RBP29.47■■■□□ 2.31
SPG7-208ENST00000563783 PQBP1O60828 265 aaKnown RBP29.47■■■□□ 2.31
SPG7-208ENST00000563783 ALDH5A1P51649 535 aaPredicted RBP29.47■■■□□ 2.31
SPG7-208ENST00000563783 TAPT1Q6NXT6 567 aa29.47■■■□□ 2.31
SPG7-208ENST00000563783 DNERQ8NFT8 737 aa29.47■■■□□ 2.31
SPG7-208ENST00000563783 ZKSCAN3Q9BRR0 538 aa29.47■■■□□ 2.31
SPG7-208ENST00000563783 FAAP100Q0VG06 881 aa29.46■■■□□ 2.31
SPG7-208ENST00000563783 RNF207Q6ZRF8 634 aa29.46■■■□□ 2.31
SPG7-208ENST00000563783 TLK2Q86UE8 772 aa29.46■■■□□ 2.31
SPG7-208ENST00000563783 UBAC1Q9BSL1 405 aa29.46■■■□□ 2.31
SPG7-208ENST00000563783 TNKSO95271 1327 aa29.45■■■□□ 2.31
SPG7-208ENST00000563783 AP5M1Q9H0R1 490 aa29.45■■■□□ 2.31
SPG7-208ENST00000563783 TMEM39AQ9NV64 488 aa29.45■■■□□ 2.31
SPG7-208ENST00000563783 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.44■■■□□ 2.3
SPG7-208ENST00000563783 RBM47A0AV96 593 aaKnown RBP29.44■■■□□ 2.3
SPG7-208ENST00000563783 PTPDC1A2A3K4 754 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 B4DLN1 442 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 ARVCFO00192 962 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 ZEB2O60315 1214 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 RAG1P15918 1043 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 SMPD1P17405 629 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 CHMLP26374 656 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 MRPL12P52815 198 aaKnown RBP29.44■■■□□ 2.3
SPG7-208ENST00000563783 FSCN1Q16658 493 aaKnown RBP29.44■■■□□ 2.3
SPG7-208ENST00000563783 DEFB123Q8N688 67 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 IL25Q9H293 177 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 TBX21Q9UL17 535 aa29.44■■■□□ 2.3
SPG7-208ENST00000563783 EDNRBP24530 442 aa29.43■■■□□ 2.3
SPG7-208ENST00000563783 DUSP28Q4G0W2 176 aa29.43■■■□□ 2.3
SPG7-208ENST00000563783 NOL8Q76FK4 1167 aaKnown RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms