RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 NOVP48745 357 aa18.69■□□□□ 0.58
LPCAT4-205ENST00000563748 LRRC41Q15345 812 aa18.69■□□□□ 0.58
LPCAT4-205ENST00000563748 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
LPCAT4-205ENST00000563748 ANP32BQ92688 251 aaKnown RBP18.69■□□□□ 0.58
LPCAT4-205ENST00000563748 CHMP4CQ96CF2 233 aa18.69■□□□□ 0.58
LPCAT4-205ENST00000563748 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
LPCAT4-205ENST00000563748 SYNGAP1Q96PV0 1343 aa18.69■□□□□ 0.58
LPCAT4-205ENST00000563748 TMEM232C9JQI7 657 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 SOX1O00570 391 aaPredicted RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 NMT2O60551 498 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 PLA2G6O60733 806 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 FGAP02671 866 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 HMGB1P09429 215 aaKnown RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 STAT2P52630 851 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 ATN1P54259 1190 aaPredicted RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 RTP1P59025 263 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 ZNF467Q7Z7K2 595 aaPredicted RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 ZNF589Q86UQ0 364 aaPredicted RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 FAM160B2Q86V87 743 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 CHST13Q8NET6 341 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 CHURC1Q8WUH1 139 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 STAG1Q8WVM7 1258 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 FBXO40Q9UH90 709 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 STX8Q9UNK0 236 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 LAMA4Q16363 1823 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 RANBP6O60518 1105 aaKnown RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 HSPD1P10809 573 aaKnown RBP18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 RARBP10826 455 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 RPS6KB1P23443 525 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 SLC1A4P43007 532 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 SNX17Q15036 470 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 SLC39A5Q6ZMH5 540 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 XPNPEP3Q9NQH7 507 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
LPCAT4-205ENST00000563748 ZNF536O15090 1300 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 STX6O43752 255 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 SNAI1O95863 264 aaPredicted RBP18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 AKR1A1P14550 325 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 ADCYAP1R1P41586 468 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 ZSCAN23Q3MJ62 389 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 RCSD1Q6JBY9 416 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 FGD4Q96M96 766 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 DSCC1Q9BVC3 393 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 UBE2OQ9C0C9 1292 aaKnown RBP18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
LPCAT4-205ENST00000563748 MYCNP04198 464 aaPredicted RBP18.66■□□□□ 0.58
LPCAT4-205ENST00000563748 ADCK5Q3MIX3 580 aa18.66■□□□□ 0.58
LPCAT4-205ENST00000563748 CAVIN1Q6NZI2 390 aaKnown RBP18.66■□□□□ 0.58
LPCAT4-205ENST00000563748 KCTD1Q719H9 257 aa18.66■□□□□ 0.58
LPCAT4-205ENST00000563748 NOL8Q76FK4 1167 aaKnown RBP18.66■□□□□ 0.58
LPCAT4-205ENST00000563748 TDHQ8IZJ6 230 aa18.66■□□□□ 0.58
LPCAT4-205ENST00000563748 ANKRD35Q8N283 1001 aa18.66■□□□□ 0.58
LPCAT4-205ENST00000563748 CCDC173Q0VFZ6 552 aa18.65■□□□□ 0.58
LPCAT4-205ENST00000563748 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
LPCAT4-205ENST00000563748 RASGRP2Q7LDG7 609 aa18.65■□□□□ 0.58
LPCAT4-205ENST00000563748 LRCH3Q96II8 777 aa18.65■□□□□ 0.58
LPCAT4-205ENST00000563748 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
LPCAT4-205ENST00000563748 ATP11BQ9Y2G3 1177 aa18.65■□□□□ 0.58
LPCAT4-205ENST00000563748 LRRC37A2A6NM11 1700 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 ADAMTS4O75173 837 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 LETM1O95202 739 aaPredicted RBP18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 PGK1P00558 417 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 SYT1P21579 422 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 MDM2Q00987 491 aaPredicted RBP18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 TKFCQ3LXA3 575 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 LRIT3Q3SXY7 679 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 C1orf53Q5VUE5 145 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 RNF180Q86T96 592 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 GPT2Q8TD30 523 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 DCAF4Q8WV16 495 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 FERMT2Q96AC1 680 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 LENG1Q96BZ8 264 aaPredicted RBP18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 AGBL1Q96MI9 1066 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 ACAD9Q9H845 621 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 TOMM22Q9NS69 142 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 TCP11L1Q9NUJ3 509 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 FAM184BQ9ULE4 1060 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 PRR12Q9ULL5 1215 aa18.64■□□□□ 0.57
LPCAT4-205ENST00000563748 LCTP09848 1927 aa18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 F13A1P00488 732 aa18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 TOP1P11387 765 aaKnown RBP18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 PCP11498 1178 aaKnown RBP18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 HAND2P61296 217 aa18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 TRIM60Q495X7 471 aa18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 RRP12Q5JTH9 1297 aaKnown RBP18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 GAS2L3Q86XJ1 694 aa18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 FAM133AQ8N9E0 248 aa18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 RNF146Q9NTX7 359 aa18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 ZHX1Q9UKY1 873 aaPredicted RBP18.63■□□□□ 0.57
LPCAT4-205ENST00000563748 SYNRGQ9UMZ2 1314 aa18.62■□□□□ 0.57
LPCAT4-205ENST00000563748 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
LPCAT4-205ENST00000563748 ACVR2BQ13705 512 aa18.62■□□□□ 0.57
LPCAT4-205ENST00000563748 AKNAD1Q5T1N1 836 aa18.62■□□□□ 0.57
LPCAT4-205ENST00000563748 LRSAM1Q6UWE0 723 aa18.62■□□□□ 0.57
LPCAT4-205ENST00000563748 NEK1Q96PY6 1258 aa18.62■□□□□ 0.57
LPCAT4-205ENST00000563748 LBHD1Q9BQE6 289 aaPredicted RBP18.62■□□□□ 0.57
LPCAT4-205ENST00000563748 TMEM47Q9BQJ4 181 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms