RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 IRX5P78411 483 aaPredicted RBP20.4■□□□□ 0.86
TSC2-219ENST00000563346 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 FAAP100Q0VG06 881 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 MUM1L1Q5H9M0 696 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 MROH7Q68CQ1 1323 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 NSMFQ6X4W1 530 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 MFSD6Q6ZSS7 791 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 SMC5Q8IY18 1101 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 TMEM47Q9BQJ4 181 aa20.4■□□□□ 0.86
TSC2-219ENST00000563346 UPF3AQ9H1J1 476 aaKnown RBP20.4■□□□□ 0.86
TSC2-219ENST00000563346 FRMPD2Q68DX3 1309 aaPredicted RBP20.39■□□□□ 0.85
TSC2-219ENST00000563346 ICAM1P05362 532 aa20.39■□□□□ 0.85
TSC2-219ENST00000563346 SLC16A2P36021 539 aa20.39■□□□□ 0.85
TSC2-219ENST00000563346 TTBK2Q6IQ55 1244 aa20.39■□□□□ 0.85
TSC2-219ENST00000563346 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.39■□□□□ 0.85
TSC2-219ENST00000563346 KATNBL1Q9H079 304 aa20.39■□□□□ 0.85
TSC2-219ENST00000563346 GPCPD1Q9NPB8 672 aa20.39■□□□□ 0.85
TSC2-219ENST00000563346 TCP11L1Q9NUJ3 509 aa20.39■□□□□ 0.85
TSC2-219ENST00000563346 CYP39A1Q9NYL5 469 aa20.39■□□□□ 0.85
TSC2-219ENST00000563346 PCP11498 1178 aaKnown RBP20.38■□□□□ 0.85
TSC2-219ENST00000563346 FPGSQ05932 587 aa20.38■□□□□ 0.85
TSC2-219ENST00000563346 AKNAD1Q5T1N1 836 aa20.38■□□□□ 0.85
TSC2-219ENST00000563346 SYDE2Q5VT97 1194 aa20.38■□□□□ 0.85
TSC2-219ENST00000563346 CHD1LQ86WJ1 897 aa20.38■□□□□ 0.85
TSC2-219ENST00000563346 RNPC3Q96LT9 517 aaKnown RBP20.38■□□□□ 0.85
TSC2-219ENST00000563346 GUCD1Q96NT3 240 aa20.38■□□□□ 0.85
TSC2-219ENST00000563346 RANBP17Q9H2T7 1088 aaKnown RBP20.38■□□□□ 0.85
TSC2-219ENST00000563346 RNF41Q9H4P4 317 aaPredicted RBP20.38■□□□□ 0.85
TSC2-219ENST00000563346 A0A0U1RQG5 324 aaPredicted RBP20.37■□□□□ 0.85
TSC2-219ENST00000563346 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.37■□□□□ 0.85
TSC2-219ENST00000563346 SDSP20132 328 aa20.37■□□□□ 0.85
TSC2-219ENST00000563346 BTNL9Q6UXG8 535 aa20.37■□□□□ 0.85
TSC2-219ENST00000563346 AP5M1Q9H0R1 490 aa20.37■□□□□ 0.85
TSC2-219ENST00000563346 EYSQ5T1H1 3165 aa20.36■□□□□ 0.85
TSC2-219ENST00000563346 ARVCFO00192 962 aa20.36■□□□□ 0.85
TSC2-219ENST00000563346 SMAD3P84022 425 aaKnown RBP20.36■□□□□ 0.85
TSC2-219ENST00000563346 BEX3Q00994 111 aa20.36■□□□□ 0.85
TSC2-219ENST00000563346 EEPD1Q7L9B9 569 aa20.36■□□□□ 0.85
TSC2-219ENST00000563346 TLK2Q86UE8 772 aa20.36■□□□□ 0.85
TSC2-219ENST00000563346 TTC14Q96N46 770 aa20.36■□□□□ 0.85
TSC2-219ENST00000563346 ZNF213O14771 459 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 TLR3O15455 904 aaKnown RBP20.35■□□□□ 0.85
TSC2-219ENST00000563346 TIMP1P01033 207 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 IGHDP01880 384 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 PDHBP11177 359 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 CDK7P50613 346 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 EPHB4P54760 987 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 NUCB1Q02818 461 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 TBC1D10CQ8IV04 446 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 PLEKHM2Q8IWE5 1019 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 FBXO16Q8IX29 292 aaPredicted RBP20.35■□□□□ 0.85
TSC2-219ENST00000563346 ESR2Q92731 530 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 DIAPH3Q9NSV4 1193 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 ADD3Q9UEY8 706 aaKnown RBP20.35■□□□□ 0.85
TSC2-219ENST00000563346 PNMA2Q9UL42 364 aa20.35■□□□□ 0.85
TSC2-219ENST00000563346 DDX49Q9Y6V7 483 aaKnown RBP20.35■□□□□ 0.85
TSC2-219ENST00000563346 ASTN1O14525 1302 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 LRRC37A2A6NM11 1700 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 PTPDC1A2A3K4 754 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 CTAGE5O15320 804 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 DYNC1LI2O43237 492 aaPredicted RBP20.34■□□□□ 0.85
TSC2-219ENST00000563346 ZEB2O60315 1214 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 SMPD1P17405 629 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 NKX3-2P78367 333 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 BAATQ14032 418 aaPredicted RBP20.34■□□□□ 0.85
TSC2-219ENST00000563346 FSCN1Q16658 493 aaKnown RBP20.34■□□□□ 0.85
TSC2-219ENST00000563346 IQSEC1Q6DN90 963 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 CWC27Q6UX04 472 aaKnown RBP20.34■□□□□ 0.85
TSC2-219ENST00000563346 PURBQ96QR8 312 aaKnown RBP20.34■□□□□ 0.85
TSC2-219ENST00000563346 OSBPL3Q9H4L5 887 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 VTA1Q9NP79 307 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 PDGFCQ9NRA1 345 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 TBX21Q9UL17 535 aa20.34■□□□□ 0.85
TSC2-219ENST00000563346 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
TSC2-219ENST00000563346 CABYRO75952 493 aa20.33■□□□□ 0.85
TSC2-219ENST00000563346 ZNF543Q08ER8 600 aa20.33■□□□□ 0.85
TSC2-219ENST00000563346 CXCL17Q6UXB2 119 aa20.33■□□□□ 0.85
TSC2-219ENST00000563346 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
TSC2-219ENST00000563346 EXOC6Q8TAG9 804 aa20.33■□□□□ 0.85
TSC2-219ENST00000563346 ZKSCAN3Q9BRR0 538 aa20.33■□□□□ 0.85
TSC2-219ENST00000563346 NEDD4P46934 1319 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 HIP1O00291 1037 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 NFIBO00712 420 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 MFSD5Q6N075 450 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 TAPT1Q6NXT6 567 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 FAM126BQ8IXS8 530 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 SEMA6BQ9H3T3 888 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 VCANP13611 3396 aa20.32■□□□□ 0.84
TSC2-219ENST00000563346 LCTP09848 1927 aa20.31■□□□□ 0.84
TSC2-219ENST00000563346 CALML3P27482 149 aa20.31■□□□□ 0.84
TSC2-219ENST00000563346 ALDH5A1P51649 535 aaPredicted RBP20.31■□□□□ 0.84
TSC2-219ENST00000563346 PPIGQ13427 754 aaKnown RBP eCLIP20.31■□□□□ 0.844e-6■■□□□ 13.5
TSC2-219ENST00000563346 RNF207Q6ZRF8 634 aa20.31■□□□□ 0.84
TSC2-219ENST00000563346 IQCA1Q86XH1 822 aa20.31■□□□□ 0.84
TSC2-219ENST00000563346 TMEM199Q8N511 208 aa20.31■□□□□ 0.84
TSC2-219ENST00000563346 MPHOSPH6Q99547 160 aaKnown RBP20.31■□□□□ 0.84
TSC2-219ENST00000563346 PPP1R12CQ9BZL4 782 aa20.31■□□□□ 0.84
TSC2-219ENST00000563346 Q9Y3F1 56 aa20.31■□□□□ 0.84
TSC2-219ENST00000563346 LOC102724159A0A0B4J2E5 919 aa20.3■□□□□ 0.84
TSC2-219ENST00000563346 SNHG28P0DPA3 235 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms