RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 C19orf67A6NJJ6 358 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 CYP2C9P11712 490 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 FSCN1Q16658 493 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 RALGAPA2Q2PPJ7 1873 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 DEFB128Q7Z7B8 93 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 TLK2Q86UE8 772 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 GDPD5Q8WTR4 605 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 EAF2Q96CJ1 260 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 NUP88Q99567 741 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 SLF1Q9BQI6 1058 aa9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 CCDC8Q9H0W5 538 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 TRMT13Q9NUP7 481 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-206ENST00000563343 TCRBV5S4A2TA0A5A2 114 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 DCXO43602 365 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 GNAI2P04899 355 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 SMPD1P17405 629 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 CDK8P49336 464 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 CNTN2Q02246 1040 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 HFE2Q6ZVN8 426 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 LCORLQ8N3X6 602 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 FAM133AQ8N9E0 248 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 SSH3Q8TE77 659 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 CCDC17Q96LX7 622 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 CRNKL1Q9BZJ0 848 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 SUGCTQ9HAC7 445 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 DDX49Q9Y6V7 483 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 ZDBF2Q9HCK1 2354 aa9.34□□□□□ -0.91
HERPUD1-206ENST00000563343 TNKSO95271 1327 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 CYP2D7A0A087X1C5 515 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 SOWAHBA6NEL2 793 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 DYNC1LI2O43237 492 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 IQCF3P0C7M6 154 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 ACTN1P12814 892 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 PDE6AP16499 860 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 KCNA5P22460 613 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 SSTR3P32745 418 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 RFC2P35250 354 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 ERVK-21P61565 698 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 GPNMBQ14956 572 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 CSPP1Q1MSJ5 1256 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 C12orf60Q5U649 245 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 PTCRAQ6ISU1 281 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 TAPT1Q6NXT6 567 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 C16orf86Q6ZW13 317 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 TMCO2Q7Z6W1 182 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 CPXCR1Q8N123 301 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 PRSS33Q8NF86 280 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 NEK9Q8TD19 979 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 ARHGAP45Q92619 1136 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 KANSL2Q9H9L4 492 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 SLC38A10Q9HBR0 1119 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 PDGFCQ9NRA1 345 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 TNNQ9UQP3 1299 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 NOP58Q9Y2X3 529 aaKnown RBP9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 Q9Y3F1 56 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 DCHS1Q96JQ0 3298 aa9.33□□□□□ -0.92
HERPUD1-206ENST00000563343 ZNF536O15090 1300 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 KIF28PB7ZC32 967 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 PRKAB2O43741 272 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 ST18O60284 1047 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 BAIAP3O94812 1187 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 ZP2Q05996 745 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 FAM9BQ8IZU0 186 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 ANKRD35Q8N283 1001 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 PRPF38AQ8NAV1 312 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 CHST13Q8NET6 341 aa9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 RAVER2Q9HCJ3 691 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 ALG13Q9NP73 1137 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-206ENST00000563343 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 F5H6K3 240 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 RBAK-RBAKDNI3L0D1 243 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 ZEB2O60315 1214 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 NDUFB10O96000 172 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 CT47B1P0C2W7 299 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 SUPT20HL2P0C7V6 817 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 RARSP54136 660 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 WDR5P61964 334 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 PURAQ00577 322 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 KLRC3Q07444 240 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 COL19A1Q14993 1142 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 TCTN1Q2MV58 587 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 SLC9C2Q5TAH2 1124 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 IQSEC1Q6DN90 963 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 AP5M1Q9H0R1 490 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 ARMT1Q9H993 441 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 A1CFQ9NQ94 594 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 FBXO40Q9UH90 709 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 MYO7AQ13402 2215 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 KIAA1217Q5T5P2 1943 aa9.31□□□□□ -0.92
HERPUD1-206ENST00000563343 MYO15AQ9UKN7 3530 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 LINC01553A4QN01 128 aa9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 SURF6O75683 361 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-206ENST00000563343 IRS1P35568 1242 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms