RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 U2AF1L5P0DN76 240 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-205ENST00000563283 PRKAR2BP31323 418 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 U2AF1Q01081 240 aaKnown RBP eCLIP6.76□□□□□ -1.33
CNOT1-205ENST00000563283 ITPK1Q13572 414 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 DNAJC14Q6Y2X3 702 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-205ENST00000563283 UBE3DQ7Z6J8 389 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 NPAS4Q8IUM7 802 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 PLD6Q8N2A8 252 aaKnown RBP6.76□□□□□ -1.33
CNOT1-205ENST00000563283 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 ELMO3Q96BJ8 720 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 MRS2Q9HD23 443 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 PICK1Q9NRD5 415 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 RNF19AQ9NV58 838 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 C5P01031 1676 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 COL24A1Q17RW2 1714 aa6.76□□□□□ -1.33
CNOT1-205ENST00000563283 MYH14Q7Z406 1995 aaKnown RBP6.75□□□□□ -1.33
CNOT1-205ENST00000563283 ZNF831Q5JPB2 1677 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 MRC1P22897 1456 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 PALLDQ8WX93 1383 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 OXCT1P55809 520 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 RPS26P62854 115 aaKnown RBP6.75□□□□□ -1.33
CNOT1-205ENST00000563283 PTPN11Q06124 597 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-205ENST00000563283 SLC15A2Q16348 729 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 TTBK2Q6IQ55 1244 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 LRFN4Q6PJG9 635 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 KCT2Q8NC54 265 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 FMNL2Q96PY5 1086 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 COL5A3P25940 1745 aaPredicted RBP6.75□□□□□ -1.33
CNOT1-205ENST00000563283 TJP1Q07157 1748 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 QSER1Q2KHR3 1735 aa6.75□□□□□ -1.33
CNOT1-205ENST00000563283 UBR2Q8IWV8 1755 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 CEMIPQ8WUJ3 1361 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 C4BP0C0L5 1744 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 CEACAM5P06731 702 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 DCTN1Q14203 1278 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 INPP5AQ14642 412 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 CCDC85BQ15834 202 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-205ENST00000563283 IFI16Q16666 785 aaKnown RBP6.74□□□□□ -1.33
CNOT1-205ENST00000563283 ZNF574Q6ZN55 896 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-205ENST00000563283 CYFIP1Q7L576 1253 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 FAM214BQ7L5A3 538 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 LINC00116Q8NCU8 138 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 SLC52A2Q9HAB3 445 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 PRDM10Q9NQV6 1147 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 TMOD3Q9NYL9 352 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 UBR3Q6ZT12 1888 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 KCPQ6ZWJ8 1503 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 PNPLA7Q6ZV29 1317 aa6.74□□□□□ -1.33
CNOT1-205ENST00000563283 LRP5O75197 1615 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 CICQ96RK0 1608 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-205ENST00000563283 MAP3K5Q99683 1374 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 GOLGB1Q14789 3259 aaKnown RBP6.73□□□□□ -1.33
CNOT1-205ENST00000563283 GNAT3A8MTJ3 354 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 CCER2I3L3R5 266 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 KCNQ3O43525 872 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 PRKCQQ04759 706 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 SLC39A6Q13433 755 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 WDR43Q15061 677 aaKnown RBP eCLIP6.73□□□□□ -1.33
CNOT1-205ENST00000563283 C1orf141Q5JVX7 400 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 ARHGAP27Q6ZUM4 889 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 CDC37L1Q7L3B6 337 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 HDXQ7Z353 690 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 SPRED2Q7Z698 418 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 ZNF507Q8TCN5 953 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 PLPPR2Q96GM1 343 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 HEXIM2Q96MH2 286 aaKnown RBP6.73□□□□□ -1.33
CNOT1-205ENST00000563283 PARP2Q9UGN5 583 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 CCNL1Q9UK58 526 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-205ENST00000563283 VAV3Q9UKW4 847 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 NUDCQ9Y266 331 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 SNCAIPQ9Y6H5 919 aa6.73□□□□□ -1.33
CNOT1-205ENST00000563283 PRAMEF27A3QJZ7 478 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 IGF2BP3O00425 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
CNOT1-205ENST00000563283 LRIG2O94898 1065 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 HSP90AB1P08238 724 aaKnown RBP6.72□□□□□ -1.33
CNOT1-205ENST00000563283 DAB2P98082 770 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 BNIP3Q12983 259 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-205ENST00000563283 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 MCM10Q7L590 875 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 COL23A1Q86Y22 540 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-205ENST00000563283 THUMPD2Q9BTF0 503 aaKnown RBP6.72□□□□□ -1.33
CNOT1-205ENST00000563283 TNKS2Q9H2K2 1166 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 GTF2IRD1Q9UHL9 959 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
CNOT1-205ENST00000563283 TMEM265A0A087WTH1 108 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 ZBTB7AO95365 584 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 ITGB5P18084 799 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 LIG3P49916 1009 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 WIPI1Q5MNZ9 446 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-205ENST00000563283 MEI1Q5TIA1 1274 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 AGMOQ6ZNB7 445 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 FBXO33Q7Z6M2 555 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 CCDC146Q8IYE0 955 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 FAM9BQ8IZU0 186 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 PNISRQ8TF01 805 aaKnown RBP6.71□□□□□ -1.34
CNOT1-205ENST00000563283 SMARCC1Q92922 1105 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-205ENST00000563283 HRASLS5Q96KN8 279 aa6.71□□□□□ -1.34
CNOT1-205ENST00000563283 WNT10AQ9GZT5 417 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms