RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMG1-207ENST00000563235 NKIRAS2Q9NYR9 191 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 BRD4O60885 1362 aaPredicted RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 STRCQ7RTU9 1775 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 MAGI3Q5TCQ9 1506 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 FGD5Q6ZNL6 1462 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 C17orf113A0A1B0GUU1 675 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 LRRC10BA6NIK2 292 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 TGDSO95455 350 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 CYP1A2P05177 515 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 HOXB1P14653 301 aaPredicted RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 TNNT3P45378 269 aaPredicted RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 AP1B1Q10567 949 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 STAT4Q14765 748 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 RASA2Q15283 850 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 C11orf91Q3C1V1 193 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 TNNI3KQ59H18 835 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 POMZP3Q6PJE2 187 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 BTNL9Q6UXG8 535 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 DSTYKQ6XUX3 929 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 NECAB2Q7Z6G3 386 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 FNIP1Q8TF40 1166 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 ZNF606Q8WXB4 792 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 CLUHP3Q96NS8 147 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 IPO9Q96P70 1041 aaKnown RBP5.42□□□□□ -1.54
SMG1-207ENST00000563235 RMDN3Q96TC7 470 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 ABCC2Q92887 1545 aa5.42□□□□□ -1.54
SMG1-207ENST00000563235 PHF20L1A8MW92 1017 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 MINDY4BA8MYZ0 360 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 GPR39O43194 453 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 EOMESO95936 686 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CYP11A1P05108 521 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 FAM153BP0C7A2 387 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CCNCP24863 283 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 IRS1P35568 1242 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 MXI1P50539 228 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 TPD52P55327 224 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 GTF2IP78347 998 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 PPA1Q15181 289 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 KAZNQ674X7 775 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CNNM4Q6P4Q7 775 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ZER1Q7Z7L7 766 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 THEMISQ8N1K5 641 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 SPATA5Q8NB90 893 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ZNF540Q8NDQ6 660 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 SPATA18Q8TC71 538 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 SSH3Q8TE77 659 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 CLIP3Q96DZ5 547 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 SGCZQ96LD1 299 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 UIMC1Q96RL1 719 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 DEF6Q9H4E7 631 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 MAN1C1Q9NR34 630 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 HELLSQ9NRZ9 838 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ABCF3Q9NUQ8 709 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 UBP1Q9NZI7 540 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 EPS15L1Q9UBC2 864 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ZMYM5Q9UJ78 669 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 UHRF1BP1LA0JNW5 1464 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 FOXD2O60548 495 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 KRT38O76015 456 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 GJB6O95452 261 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 FGFR1OPO95684 399 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 SFTPCP11686 197 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 KRT13P13646 458 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 HOXB3P14651 431 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 IL6STP40189 918 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 SKIV2L2P42285 1042 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 ATP1A2P50993 1020 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 AK2P54819 239 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 RRP1P56182 461 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 SKOR1P84550 965 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 TMPRSS15P98073 1019 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 AKAP17AQ02040 695 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 PPP2R5DQ14738 602 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 TTC31Q49AM3 519 aaPredicted RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 FAM205BPQ63HN1 556 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 GPR155Q7Z3F1 870 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 SLFN12Q8IYM2 578 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 TBC1D21Q8IYX1 336 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 MYOCDQ8IZQ8 938 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 PPM1NQ8N819 430 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ADAMTS18Q8TE60 1221 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 SEC62Q99442 399 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 BRD9Q9H8M2 597 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 PAPOLBQ9NRJ5 636 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 TBC1D7Q9P0N9 293 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 ANKIB1Q9P2G1 1089 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 YEATS2Q9ULM3 1422 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 PAXBP1Q9Y5B6 917 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 PCDHGB5Q9Y5G0 923 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 DDX49Q9Y6V7 483 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 EPRSP07814 1512 aaKnown RBP5.41□□□□□ -1.54
SMG1-207ENST00000563235 RUSC2Q8N2Y8 1516 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 A0A087WZG4 1122 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 FSD2A1L4K1 749 aa5.41□□□□□ -1.54
SMG1-207ENST00000563235 MYO1BO43795 1136 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms