RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 IRX5P78411 483 aaPredicted RBP18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 TFAP4Q01664 338 aa18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 ITGA7Q13683 1181 aa18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 RPUSD2Q8IZ73 545 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 TRERF1Q96PN7 1200 aa18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 THEGQ9P2T0 379 aa18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 ISY1Q9ULR0 285 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 ZNF536O15090 1300 aa18.69■□□□□ 0.58
HERPUD1-205ENST00000562914 LOC102724159A0A0B4J2E5 919 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 SOWAHBA6NEL2 793 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 ACRP10323 421 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 CYP2C18P33260 490 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 PBX2P40425 430 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 BEX3Q00994 111 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 PPARAQ07869 468 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 PWP2Q15269 919 aaKnown RBP18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 AGBL1Q96MI9 1066 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 PRDM12Q9H4Q4 367 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 SLC28A3Q9HAS3 691 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 MCM3APO60318 1980 aa18.68■□□□□ 0.58
HERPUD1-205ENST00000562914 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.67■□□□□ 0.58
HERPUD1-205ENST00000562914 GRXCR1A8MXD5 290 aa18.67■□□□□ 0.58
HERPUD1-205ENST00000562914 PFKMP08237 780 aa18.67■□□□□ 0.58
HERPUD1-205ENST00000562914 RCSD1Q6JBY9 416 aa18.67■□□□□ 0.58
HERPUD1-205ENST00000562914 VTA1Q9NP79 307 aa18.67■□□□□ 0.58
HERPUD1-205ENST00000562914 ASTN1O14525 1302 aa18.67■□□□□ 0.58
HERPUD1-205ENST00000562914 TTC28Q96AY4 2481 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 DYNC1LI2O43237 492 aaPredicted RBP18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 SUPT20HL2P0C7V6 817 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 ALAS1P13196 640 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 SMPD1P17405 629 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 MCCP23508 829 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 MRPS5P82675 430 aaKnown RBP18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 MORC4Q8TE76 937 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 ASB2Q96Q27 587 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 TSPYL2Q9H2G4 693 aaPredicted RBP18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 CYP39A1Q9NYL5 469 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 ADD3Q9UEY8 706 aaKnown RBP18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 STX8Q9UNK0 236 aa18.66■□□□□ 0.58
HERPUD1-205ENST00000562914 TSPY2A6NKD2 308 aa18.65■□□□□ 0.58
HERPUD1-205ENST00000562914 DIEXFQ68CQ4 756 aaKnown RBP18.65■□□□□ 0.58
HERPUD1-205ENST00000562914 TAPT1Q6NXT6 567 aa18.65■□□□□ 0.58
HERPUD1-205ENST00000562914 NOC4LQ9BVI4 516 aaKnown RBP18.65■□□□□ 0.58
HERPUD1-205ENST00000562914 PNMA2Q9UL42 364 aa18.65■□□□□ 0.58
HERPUD1-205ENST00000562914 PRR12Q9ULL5 1215 aa18.65■□□□□ 0.58
HERPUD1-205ENST00000562914 ICAM1P05362 532 aa18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 FSD1Q9BTV5 496 aa18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 POLR3EQ9NVU0 708 aa18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 CXXC1Q9P0U4 656 aaPredicted RBP18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 CCPG1Q9ULG6 757 aa18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 SLC4A7Q9Y6M7 1214 aa18.64■□□□□ 0.57
HERPUD1-205ENST00000562914 LRRC37A2A6NM11 1700 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 MUC3AQ02505 3323 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 B4GALT4O60513 344 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 NOVP48745 357 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 DUSP28Q4G0W2 176 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 KIAA1211Q6ZU35 1233 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 KCTD1Q719H9 257 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 OTOP2Q7RTS6 562 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 DCAF4Q8WV16 495 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 NKX2-4Q9H2Z4 354 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 PCDHA11Q9Y5I1 949 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 GRIN2DO15399 1336 aa18.63■□□□□ 0.57
HERPUD1-205ENST00000562914 IGFBP4P22692 258 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 CPT1AP50416 773 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 CCL23P55773 120 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 ADGRE1Q14246 886 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 BRDTQ58F21 947 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 MUM1L1Q5H9M0 696 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 C20orf194Q5TEA3 1177 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 NSMFQ6X4W1 530 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 FBXO16Q8IX29 292 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 PI4K2BQ8TCG2 481 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 MPHOSPH6Q99547 160 aaKnown RBP18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 WNT8AQ9H1J5 351 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 ALDH8A1Q9H2A2 487 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 PDGFCQ9NRA1 345 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
HERPUD1-205ENST00000562914 UMODL1Q5DID0 1318 aa18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 RAD50Q92878 1312 aa18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 PPP2R2DQ66LE6 453 aa18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 TRPV6Q9H1D0 765 aa18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 IL17RBQ9NRM6 502 aa18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 YBX2Q9Y2T7 364 aaKnown RBP18.61■□□□□ 0.57
HERPUD1-205ENST00000562914 NKRFO15226 690 aaKnown RBP eCLIP18.6■□□□□ 0.57
HERPUD1-205ENST00000562914 ORC4O43929 436 aa18.6■□□□□ 0.57
HERPUD1-205ENST00000562914 KPNA6O60684 536 aa18.6■□□□□ 0.57
HERPUD1-205ENST00000562914 RFC2P35250 354 aa18.6■□□□□ 0.57
HERPUD1-205ENST00000562914 AAK1Q2M2I8 961 aa18.6■□□□□ 0.57
HERPUD1-205ENST00000562914 EEPD1Q7L9B9 569 aa18.6■□□□□ 0.57
HERPUD1-205ENST00000562914 ADAMTS19Q8TE59 1207 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms