RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 RSPO4Q2I0M5 234 aaPredicted RBP7.82□□□□□ -1.16
TCF4-213ENST00000562543 CFAP100Q494V2 611 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 KRT40Q6A162 431 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 LURAP1LQ8IV03 231 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 ADSSL1Q8N142 457 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 ZNF417Q8TAU3 575 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 PSMG3-AS1Q96PY0 264 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 SMG1Q96Q15 3661 aaKnown RBP7.82□□□□□ -1.16
TCF4-213ENST00000562543 ZNF587Q96SQ5 575 aaPredicted RBP7.82□□□□□ -1.16
TCF4-213ENST00000562543 MDFIQ99750 246 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 FSD1Q9BTV5 496 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 TPSG1Q9NRR2 321 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 ZNF232Q9UNY5 417 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 STARD13Q9Y3M8 1113 aa7.82□□□□□ -1.16
TCF4-213ENST00000562543 COL4A4P53420 1690 aaPredicted RBP7.82□□□□□ -1.16
TCF4-213ENST00000562543 EP300Q09472 2414 aaPredicted RBP7.81□□□□□ -1.16
TCF4-213ENST00000562543 BPTFQ12830 3046 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 KIAA0355O15063 1070 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 HMOX1P09601 288 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 NCOA4Q13772 614 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 PUM1Q14671 1186 aaKnown RBP eCLIP7.81□□□□□ -1.16
TCF4-213ENST00000562543 FAM110CQ1W6H9 321 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 EML3Q32P44 896 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 TTLL5Q6EMB2 1281 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 SLC9A9Q8IVB4 645 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 TMEM39BQ9GZU3 492 aa7.81□□□□□ -1.16
TCF4-213ENST00000562543 TRMT112Q9UI30 125 aaKnown RBP7.81□□□□□ -1.16
TCF4-213ENST00000562543 MYBBP1AQ9BQG0 1328 aaKnown RBP7.8□□□□□ -1.16
TCF4-213ENST00000562543 EML1O00423 815 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 BACH1O14867 736 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 RAG1P15918 1043 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 ATP2B4P23634 1241 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 EPHA4P54764 986 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 LAMC2Q13753 1193 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 TEAD4Q15561 434 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 GRIK4Q16099 956 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 LEXMQ3ZCV2 418 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 TMEM240Q5SV17 173 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 CERS5Q8N5B7 392 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.8□□□□□ -1.16
TCF4-213ENST00000562543 COA1Q9GZY4 146 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 NOD1Q9Y239 953 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 SLC45A1Q9Y2W3 748 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 TACC3Q9Y6A5 838 aa7.8□□□□□ -1.16
TCF4-213ENST00000562543 CYSRT1A8MQ03 144 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
TCF4-213ENST00000562543 H0Y858 1186 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 RFXAPO00287 272 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 ALBP02768 609 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 CLTBP09497 229 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 XRCC5P13010 732 aaKnown RBP7.79□□□□□ -1.16
TCF4-213ENST00000562543 CYP2B6P20813 491 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 NKAPLQ5M9Q1 402 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 C16orf59Q7L2K0 433 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 SUGP1Q8IWZ8 645 aaKnown RBP7.79□□□□□ -1.16
TCF4-213ENST00000562543 ANKRD13CQ8N6S4 541 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 SMCR8Q8TEV9 937 aaPredicted RBP7.79□□□□□ -1.16
TCF4-213ENST00000562543 LPAR1Q92633 364 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 UBE2ZQ9H832 354 aaPredicted RBP7.79□□□□□ -1.16
TCF4-213ENST00000562543 NEUROD4Q9HD90 331 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 TLR9Q9NR96 1032 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 DLL3Q9NYJ7 618 aa7.79□□□□□ -1.16
TCF4-213ENST00000562543 RRP7AQ9Y3A4 280 aaKnown RBP7.79□□□□□ -1.16
TCF4-213ENST00000562543 ZNF521Q96K83 1311 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 ZZEF1O43149 2961 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 FRYLO94915 3013 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 EPOPA6NHQ4 379 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 SIN3BO75182 1162 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 MYL6BP14649 208 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 ZKSCAN1P17029 563 aaPredicted RBP7.78□□□□□ -1.16
TCF4-213ENST00000562543 TLE2Q04725 743 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 ZP2Q05996 745 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 MCM6Q14566 821 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 TPRNQ4KMQ1 711 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 HERC4Q5GLZ8 1057 aaPredicted RBP7.78□□□□□ -1.16
TCF4-213ENST00000562543 PBXIP1Q96AQ6 731 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 ALG2Q9H553 416 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 ZNF70Q9UC06 446 aaPredicted RBP7.78□□□□□ -1.16
TCF4-213ENST00000562543 COG6Q9Y2V7 657 aa7.78□□□□□ -1.16
TCF4-213ENST00000562543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.77□□□□□ -1.17
TCF4-213ENST00000562543 A0A0G2JLL6 359 aaPredicted RBP7.77□□□□□ -1.17
TCF4-213ENST00000562543 TMEM221A6NGB7 291 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 ADARB2-AS1A8MUL3 147 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 M0R296 226 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 CXCL11O14625 94 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 INPP5BP32019 993 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 SOX11P35716 441 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 VCPP55072 806 aaKnown RBP7.77□□□□□ -1.17
TCF4-213ENST00000562543 PRRT3Q5FWE3 981 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 LRP10Q7Z4F1 713 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 PRRT2Q7Z6L0 340 aaPredicted RBP7.77□□□□□ -1.17
TCF4-213ENST00000562543 FBXL6Q8N531 539 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 EDAQ92838 391 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 NKD2Q969F2 451 aaPredicted RBP7.77□□□□□ -1.17
TCF4-213ENST00000562543 SEC31BQ9NQW1 1179 aa7.77□□□□□ -1.17
TCF4-213ENST00000562543 DDX20Q9UHI6 824 aaKnown RBP7.77□□□□□ -1.17
TCF4-213ENST00000562543 KIAA1024Q9UPX6 916 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms