RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 C9orf131Q5VYM1 1079 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 PAOXQ6QHF9 649 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 ARHGAP27Q6ZUM4 889 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 SMYD4Q8IYR2 804 aaPredicted RBP7.67□□□□□ -1.18
UBR1-203ENST00000562173 JARID2Q92833 1246 aaPredicted RBP7.67□□□□□ -1.18
UBR1-203ENST00000562173 WNT10AQ9GZT5 417 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 SEMA6CQ9H3T2 930 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 TTC21AQ8NDW8 1320 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 USP47Q96K76 1375 aa7.67□□□□□ -1.18
UBR1-203ENST00000562173 FAM95CA0A1B0GW59 222 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 PRAMEF27A3QJZ7 478 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 TOMM70O94826 608 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 MMP10P09238 476 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 CHRNA5P30532 468 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 CPSF6Q16630 551 aaKnown RBP eCLIP7.66□□□□□ -1.18
UBR1-203ENST00000562173 PPM1JQ5JR12 505 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 CDPF1Q6NVV7 123 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 SLITRK4Q8IW52 837 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 REXO1Q8N1G1 1221 aaKnown RBP7.66□□□□□ -1.18
UBR1-203ENST00000562173 JMYQ8N9B5 988 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 ZNF507Q8TCN5 953 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 RASGRP4Q8TDF6 673 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 FBLIM1Q8WUP2 373 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 PIGBQ92521 554 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 IP6K1Q92551 441 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 ISL2Q96A47 359 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 KCNF1Q9H3M0 494 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 C7orf69Q9H7B7 122 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 STOML1Q9UBI4 398 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 ASAP1Q9ULH1 1129 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 EVC2Q86UK5 1308 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 TJP1Q07157 1748 aa7.66□□□□□ -1.18
UBR1-203ENST00000562173 HCLS1P14317 486 aaPredicted RBP7.65□□□□□ -1.18
UBR1-203ENST00000562173 HSP90AB2PQ58FF8 381 aa7.65□□□□□ -1.18
UBR1-203ENST00000562173 C10orf71Q711Q0 1435 aa7.65□□□□□ -1.18
UBR1-203ENST00000562173 ANKRD31Q8N7Z5 1873 aa7.65□□□□□ -1.18
UBR1-203ENST00000562173 GPRASP2Q96D09 838 aa7.65□□□□□ -1.18
UBR1-203ENST00000562173 SRP68Q9UHB9 627 aaKnown RBP7.65□□□□□ -1.18
UBR1-203ENST00000562173 PCOLCE2Q9UKZ9 415 aa7.65□□□□□ -1.18
UBR1-203ENST00000562173 COL11A2P13942 1736 aaPredicted RBP7.64□□□□□ -1.19
UBR1-203ENST00000562173 SCO2A0A1W2PP80 73 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 CRKP46108 304 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 ETF1P62495 437 aaKnown RBP7.64□□□□□ -1.19
UBR1-203ENST00000562173 PAK2Q13177 524 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 ARTNQ5T4W7 220 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 C12orf40Q86WS4 652 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 HID1Q8IV36 788 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 DBNDD2Q9BQY9 259 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 DAGLAQ9Y4D2 1042 aa7.64□□□□□ -1.19
UBR1-203ENST00000562173 ATE1O95260 518 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 NFICP08651 508 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 GRK4P32298 578 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 CDK8P49336 464 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 DDR1Q08345 913 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 GNL2Q13823 731 aaKnown RBP7.63□□□□□ -1.19
UBR1-203ENST00000562173 TMEM201Q5SNT2 666 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 RNF43Q68DV7 783 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 SEZ6L2Q6UXD5 910 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 CDC37L1Q7L3B6 337 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 MRPL41Q8IXM3 137 aaKnown RBP7.63□□□□□ -1.19
UBR1-203ENST00000562173 NKD1Q969G9 470 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 EAF1Q96JC9 268 aaPredicted RBP7.63□□□□□ -1.19
UBR1-203ENST00000562173 UBP1Q9NZI7 540 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 CSADQ9Y600 493 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 DLEC1Q9Y238 1755 aa7.63□□□□□ -1.19
UBR1-203ENST00000562173 ROCK2O75116 1388 aaKnown RBP7.62□□□□□ -1.19
UBR1-203ENST00000562173 FOXN1O15353 648 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 RNGTTO60942 597 aaKnown RBP7.62□□□□□ -1.19
UBR1-203ENST00000562173 IMPDH2P12268 514 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 AMPHP49418 695 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 ZNF165P49910 485 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.62□□□□□ -1.19
UBR1-203ENST00000562173 GIMAP7Q8NHV1 300 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 EHMT1Q9H9B1 1298 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 SSU72Q9NP77 194 aaKnown RBP7.62□□□□□ -1.19
UBR1-203ENST00000562173 RNF181Q9P0P0 153 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 PRKAG2Q9UGJ0 569 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 INPP5FQ9Y2H2 1132 aa7.62□□□□□ -1.19
UBR1-203ENST00000562173 POLR3KQ9Y2Y1 108 aaPredicted RBP7.62□□□□□ -1.19
UBR1-203ENST00000562173 DICER1Q9UPY3 1922 aaKnown RBP7.62□□□□□ -1.19
UBR1-203ENST00000562173 EDC4Q6P2E9 1401 aaKnown RBP7.61□□□□□ -1.19
UBR1-203ENST00000562173 CARMIL3Q8ND23 1372 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 TLR3O15455 904 aaKnown RBP7.61□□□□□ -1.19
UBR1-203ENST00000562173 LRIG2O94898 1065 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 HTR3BO95264 441 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 PGRP06401 933 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 FSTP19883 344 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 CYP27A1Q02318 531 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 NFIAQ12857 509 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 SEZ6Q53EL9 994 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 METTL22Q9BUU2 404 aaPredicted RBP7.61□□□□□ -1.19
UBR1-203ENST00000562173 ACBD3Q9H3P7 528 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 ZFP64Q9NPA5 681 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 NSD3Q9BZ95 1437 aa7.61□□□□□ -1.19
UBR1-203ENST00000562173 KDRP35968 1356 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 HMX2A2RU54 273 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 IGLV1-40P01703 118 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 GYS1P13807 737 aa7.6□□□□□ -1.19
UBR1-203ENST00000562173 SOX9P48436 509 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms