RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 DCAF4Q8WV16 495 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 TMX1Q9H3N1 280 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 KANSL2Q9H9L4 492 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 TRMT1Q9NXH9 659 aaKnown RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 RWDD2AQ9UIY3 292 aa11.07□□□□□ -0.64
SMG1-205ENST00000561947 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
SMG1-205ENST00000561947 YDJCA8MPS7 323 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 ENTPD3O75355 529 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 SLC16A2P36021 539 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 PAK1Q13153 545 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 KCNB1Q14721 858 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 PTPN14Q15678 1187 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 CEP135Q66GS9 1140 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 RGS17Q9UGC6 210 aaPredicted RBP11.06□□□□□ -0.64
SMG1-205ENST00000561947 ATRNL1Q5VV63 1379 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 MYH7BA7E2Y1 1941 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 C21orf2O43822 256 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 PLCG1P19174 1290 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 CLK2P49760 499 aaKnown RBP11.06□□□□□ -0.64
SMG1-205ENST00000561947 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 SHROOM1Q2M3G4 852 aaPredicted RBP11.06□□□□□ -0.64
SMG1-205ENST00000561947 TMEM179Q6ZVK1 233 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 IGSF22Q8N9C0 903 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 LRRC15Q8TF66 581 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 CUL5Q93034 780 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 MTMR9Q96QG7 549 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 PLIN2Q99541 437 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 TDRD3Q9H7E2 651 aaKnown RBP11.06□□□□□ -0.64
SMG1-205ENST00000561947 PAXBP1Q9Y5B6 917 aa11.06□□□□□ -0.64
SMG1-205ENST00000561947 EDIL3O43854 480 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 KLRC4O43908 158 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 TECP42680 631 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 SEPT2Q15019 361 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 CALCRLQ16602 461 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 SLFN13Q68D06 897 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 POTEAQ6S8J7 498 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 NELFBQ8WX92 580 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 GDAQ9Y2T3 454 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 TDP2O95551 362 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 SLC1A4P43007 532 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 TNNI2P48788 182 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.648e-7■□□□□ 10.7
SMG1-205ENST00000561947 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
SMG1-205ENST00000561947 ICA1Q05084 483 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 GOLGA8FQ08AF8 430 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 GOLGA8DPQ0D2H9 430 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 UBE2SQ16763 222 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 PPP1R13BQ96KQ4 1090 aa11.05□□□□□ -0.64
SMG1-205ENST00000561947 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
SMG1-205ENST00000561947 KIF2AO00139 706 aaPredicted RBP11.04□□□□□ -0.64
SMG1-205ENST00000561947 SLC37A4O43826 429 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 TXKP42681 527 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 PRCPP42785 496 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 ABCB5Q2M3G0 1257 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 SIAH1Q8IUQ4 282 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 TMEM139Q8IV31 216 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 PRMT6Q96LA8 375 aaPredicted RBP11.04□□□□□ -0.64
SMG1-205ENST00000561947 MMTAG2Q9BU76 263 aaKnown RBP11.04□□□□□ -0.64
SMG1-205ENST00000561947 TEX33O43247 280 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 CCP110O43303 1012 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 RHOBTB3O94955 611 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 SPAG1Q07617 926 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 TMEM266Q2M3C6 531 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 QRICH1Q2TAL8 776 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 FILIP1LQ4L180 1135 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 FCHSD1Q86WN1 690 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 ADSSL1Q8N142 457 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 CALML4Q96GE6 196 aa11.04□□□□□ -0.64
SMG1-205ENST00000561947 LIMA1Q9UHB6 759 aaKnown RBP11.04□□□□□ -0.64
SMG1-205ENST00000561947 RAD21O60216 631 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 COBLO75128 1261 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 GDF11O95390 407 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 PBX1P40424 430 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 PPP4R3AQ6IN85 833 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 TTLL6Q8N841 843 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 GIMAP8Q8ND71 665 aaPredicted RBP11.03□□□□□ -0.64
SMG1-205ENST00000561947 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 GLT8D2Q9H1C3 349 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 ARHGAP6O43182 974 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 RSBN1LQ6PCB5 846 aaPredicted RBP11.03□□□□□ -0.64
SMG1-205ENST00000561947 RTKN2Q8IZC4 609 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 ZNF592Q92610 1267 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 CCDC47Q96A33 483 aaKnown RBP11.03□□□□□ -0.64
SMG1-205ENST00000561947 PSMD1Q99460 953 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 RAB34Q9BZG1 259 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 TRIM9Q9C026 710 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 PDGFDQ9GZP0 370 aaPredicted RBP11.03□□□□□ -0.64
SMG1-205ENST00000561947 LRWD1Q9UFC0 647 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 MAPK8IP1Q9UQF2 711 aa11.03□□□□□ -0.64
SMG1-205ENST00000561947 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
SMG1-205ENST00000561947 LRRC10BA6NIK2 292 aa11.02□□□□□ -0.64
SMG1-205ENST00000561947 AMPD3Q01432 767 aa11.02□□□□□ -0.64
SMG1-205ENST00000561947 STIM1Q13586 685 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms