RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 FECHP22830 423 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 CEP112Q8N8E3 955 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 AFF2P51816 1311 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 M0R2N6 131 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 PSMA7O14818 248 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 NAPAP54920 295 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 GRIK5Q16478 980 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 SLC35G1Q2M3R5 365 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
NEIL1-202ENST00000561643 CPVLQ9H3G5 476 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 VPS18Q9P253 973 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 MAGEC2Q9UBF1 373 aaPredicted RBP12.29□□□□□ -0.44
NEIL1-202ENST00000561643 CCNL1Q9UK58 526 aaPredicted RBP12.29□□□□□ -0.44
NEIL1-202ENST00000561643 KLRF2D3W0D1 207 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 LDHCP07864 332 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 ZNF804AQ7Z570 1209 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 DAGLBQ8NCG7 672 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
NEIL1-202ENST00000561643 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 CCDC88AQ3V6T2 1871 aa12.29□□□□□ -0.44
NEIL1-202ENST00000561643 IRS2Q9Y4H2 1338 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 PMS1P54277 932 aaKnown RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 KCNB1Q14721 858 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 NFIXQ14938 502 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 CCSER1Q9C0I3 900 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 TCP11L1Q9NUJ3 509 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 MAST2Q6P0Q8 1798 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 ROBO3Q96MS0 1386 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 EIF3CLB5ME19 914 aaKnown RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 LAD1O00515 517 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 GRAPQ13588 217 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 IRF2BP1Q8IU81 584 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 GRAPLQ8TC17 118 aaPredicted RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 EIF3CQ99613 913 aaKnown RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 NAPGQ99747 312 aaPredicted RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 LZTS2Q9BRK4 669 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 ABL1P00519 1130 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 MYL1P05976 194 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 RASA1P20936 1047 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 MAGEA9P43362 315 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 CABP7Q86V35 215 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 AMIGO3Q86WK7 504 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 MB21D1Q8N884 522 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 CCDC47Q96A33 483 aaKnown RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 CHP1Q99653 195 aa12.28□□□□□ -0.44
NEIL1-202ENST00000561643 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
NEIL1-202ENST00000561643 TTC26A0AVF1 554 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 LGALS16A8MUM7 142 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 CCNT1O60563 726 aaKnown RBP12.27□□□□□ -0.45
NEIL1-202ENST00000561643 EEF1GP26641 437 aaKnown RBP12.27□□□□□ -0.45
NEIL1-202ENST00000561643 RFC4P35249 363 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 PPP4CP60510 307 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 TUBB2AQ13885 445 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 OR8K1Q8NGG5 319 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 EYA3Q99504 573 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 TUBB2BQ9BVA1 445 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 PLEKHA4Q9H4M7 779 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 KBTBD4Q9NVX7 518 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.45
NEIL1-202ENST00000561643 KLRC4O43908 158 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 RHOBTB3O94955 611 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 OR52Z1P0C646 297 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 PLCG1P19174 1290 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 BTDP43251 543 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 DEF6Q9H4E7 631 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 VAT1LQ9HCJ6 419 aa12.27□□□□□ -0.45
NEIL1-202ENST00000561643 CCDC151A5D8V7 595 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 PRPHP41219 470 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 ARHGAP25P42331 645 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 MCM6Q14566 821 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 NONOQ15233 471 aaKnown RBP eCLIP12.26□□□□□ -0.45
NEIL1-202ENST00000561643 SOGA3Q5TF21 947 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 CSGALNACT2Q8N6G5 542 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 GIMAP8Q8ND71 665 aaPredicted RBP12.26□□□□□ -0.45
NEIL1-202ENST00000561643 EEF2KMTQ96G04 330 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 SEC63Q9UGP8 760 aaKnown RBP12.26□□□□□ -0.45
NEIL1-202ENST00000561643 GUCA1BQ9UMX6 200 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 MYH8P13535 1937 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 SMCO2A6NFE2 343 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 NDUFA10O95299 355 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 CDK8P49336 464 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 ASIC1P78348 528 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 BRD3Q15059 726 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 LONRF2Q1L5Z9 754 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 TEX11Q8IYF3 940 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 CNBD1Q8NA66 436 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 ZMYND12Q9H0C1 365 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 C6orf50Q9HD87 102 aa12.26□□□□□ -0.45
NEIL1-202ENST00000561643 EXOC1Q9NV70 894 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms