RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 DNAJB2P25686 324 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 CNTN2Q02246 1040 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 PPIGQ13427 754 aaKnown RBP eCLIP9.97□□□□□ -0.81
PALB2-202ENST00000561514 PWP2Q15269 919 aaKnown RBP9.97□□□□□ -0.81
PALB2-202ENST00000561514 TMEM240Q5SV17 173 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 CCDC174Q6PII3 467 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 CCDC129Q6ZRS4 1044 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
PALB2-202ENST00000561514 NAPBQ9H115 298 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 SPC25Q9HBM1 224 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 IL17RBQ9NRM6 502 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 RNF146Q9NTX7 359 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 Q9Y3F1 56 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 SMCHD1A6NHR9 2005 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 NCOR1O75376 2440 aa9.96□□□□□ -0.81
PALB2-202ENST00000561514 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.96□□□□□ -0.82
PALB2-202ENST00000561514 APPP05067 770 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 FOSL2P15408 326 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 MX1P20591 662 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 SLC1A4P43007 532 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 TFAP4Q01664 338 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 GRIN2CQ14957 1233 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 ALX1Q15699 326 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 RCSD1Q6JBY9 416 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 PSRC1Q6PGN9 363 aaPredicted RBP9.96□□□□□ -0.82
PALB2-202ENST00000561514 BTNL9Q6UXG8 535 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 STK11IPQ8N1F8 1099 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 FSD1Q9BTV5 496 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 CYP39A1Q9NYL5 469 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.82
PALB2-202ENST00000561514 ZMYM6O95789 1325 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 PLXNA1Q9UIW2 1896 aa9.96□□□□□ -0.82
PALB2-202ENST00000561514 ICAM1P05362 532 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 CSF2RAP15509 400 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 MCCP23508 829 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 TNFAIP2Q03169 654 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 GNASQ5JWF2 1037 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 TAPT1Q6NXT6 567 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 TLK2Q86UE8 772 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 DCAF4Q8WV16 495 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 HERVK_113Q902F9 699 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 TIFAQ96CG3 184 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 VWCEQ96DN2 955 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 TRERF1Q96PN7 1200 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 RANBP17Q9H2T7 1088 aaKnown RBP9.95□□□□□ -0.82
PALB2-202ENST00000561514 ZNF576Q9H609 170 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 VTA1Q9NP79 307 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 HOMER2Q9NSB8 354 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 PRR12Q9ULL5 1215 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 GRIN2DO15399 1336 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 BDP1A6H8Y1 2624 aa9.95□□□□□ -0.82
PALB2-202ENST00000561514 ZNFX1Q9P2E3 1918 aaKnown RBP9.94□□□□□ -0.82
PALB2-202ENST00000561514 LRRC37A2A6NM11 1700 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 RBM47A0AV96 593 aaKnown RBP9.94□□□□□ -0.82
PALB2-202ENST00000561514 TLR3O15455 904 aaKnown RBP9.94□□□□□ -0.82
PALB2-202ENST00000561514 SMPD1P17405 629 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 FSCN1Q16658 493 aaKnown RBP9.94□□□□□ -0.82
PALB2-202ENST00000561514 MUM1L1Q5H9M0 696 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 AKNAD1Q5T1N1 836 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 RASGRP2Q7LDG7 609 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 TMEM199Q8N511 208 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 USP38Q8NB14 1042 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 NOC4LQ9BVI4 516 aaKnown RBP9.94□□□□□ -0.82
PALB2-202ENST00000561514 PBX4Q9BYU1 374 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 IL23AQ9NPF7 189 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 TCP11L1Q9NUJ3 509 aa9.94□□□□□ -0.82
PALB2-202ENST00000561514 TSPY2A6NKD2 308 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 NMT2O60551 498 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 ALAS1P13196 640 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 EDNRBP24530 442 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 BEX3Q00994 111 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 DUSP28Q4G0W2 176 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 VPS53Q5VIR6 699 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 IQSEC1Q6DN90 963 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 CXCL17Q6UXB2 119 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 ZNF365Q70YC5 407 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 KCTD1Q719H9 257 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 HELLSQ9NRZ9 838 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 STX8Q9UNK0 236 aa9.93□□□□□ -0.82
PALB2-202ENST00000561514 CHD7Q9P2D1 2997 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 UMODL1Q5DID0 1318 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 WDR19Q8NEZ3 1342 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 ZEB2O60315 1214 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 TOP1P11387 765 aaKnown RBP9.92□□□□□ -0.82
PALB2-202ENST00000561514 CYP2C18P33260 490 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 PBX2P40425 430 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 CTDSPL2Q05D32 466 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 ITGA7Q13683 1181 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 RAB30Q15771 203 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 FBXO16Q8IX29 292 aaPredicted RBP9.92□□□□□ -0.82
PALB2-202ENST00000561514 SYMPKQ92797 1274 aaKnown RBP9.92□□□□□ -0.82
PALB2-202ENST00000561514 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 MAF1Q9H063 256 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 WNT8AQ9H1J5 351 aa9.92□□□□□ -0.82
PALB2-202ENST00000561514 HIPK3Q9H422 1215 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms