RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 MAD2L2Q9UI95 211 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 CCPG1Q9ULG6 757 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 NR2E3Q9Y5X4 410 aa15.79■□□□□ 0.12
SHF-210ENST00000561239 DDAH1O94760 285 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 PARP1P09874 1014 aaKnown RBP15.78■□□□□ 0.12
SHF-210ENST00000561239 GOLGA8HP0CJ92 632 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 CPA1P15085 419 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 RPS6KB1P23443 525 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 SLC35G1Q2M3R5 365 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 BLOC1S2Q6QNY1 142 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 MAMDC4Q6UXC1 1216 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 ZNF654Q8IZM8 581 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 STAG2Q8N3U4 1231 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 TCEANC2Q96MN5 208 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 LRRC2Q9BYS8 371 aa15.78■□□□□ 0.12
SHF-210ENST00000561239 ZNFX1Q9P2E3 1918 aaKnown RBP15.77■□□□□ 0.12
SHF-210ENST00000561239 POTEB2H3BUK9 544 aa15.77■□□□□ 0.12
SHF-210ENST00000561239 PSMA5P28066 241 aa15.77■□□□□ 0.12
SHF-210ENST00000561239 CATIPQ7Z7H3 387 aa15.77■□□□□ 0.12
SHF-210ENST00000561239 TRPV1Q8NER1 839 aa15.77■□□□□ 0.12
SHF-210ENST00000561239 MTMR8Q96EF0 704 aa15.77■□□□□ 0.12
SHF-210ENST00000561239 DNM1LO00429 736 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 EVI5O60447 810 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 RARBP10826 455 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 CASTP20810 708 aaKnown RBP15.76■□□□□ 0.11
SHF-210ENST00000561239 EVCP57679 992 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 MAF1Q9H063 256 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 CPVLQ9H3G5 476 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 A1CFQ9NQ94 594 aaKnown RBP15.76■□□□□ 0.11
SHF-210ENST00000561239 BRPF3Q9ULD4 1205 aa15.76■□□□□ 0.11
SHF-210ENST00000561239 ASB14A6NK59 587 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 KLRF2D3W0D1 207 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 AKR1A1P14550 325 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 RCAN1P53805 252 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 SNAP25P60880 206 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 PRAMEF19Q5SWL8 479 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 APOA5Q6Q788 366 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 ADGRF4Q8IZF3 695 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 DIS3LQ8TF46 1054 aaKnown RBP15.75■□□□□ 0.11
SHF-210ENST00000561239 UBA5Q9GZZ9 404 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 ABHD16BQ9H3Z7 469 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 RIOX1Q9H6W3 641 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 JMJD4Q9H9V9 463 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 FAM184BQ9ULE4 1060 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 PDE4DIPQ5VU43 2346 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 NID2Q14112 1375 aa15.75■□□□□ 0.11
SHF-210ENST00000561239 PLXNA1Q9UIW2 1896 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 LOC102724159A0A0B4J2E5 919 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 CCDC69A6NI79 296 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 KBTBD13C9JR72 458 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 CYTH3O43739 400 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 CALM1P0DP23 149 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 CALM2P0DP24 149 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 CALM3P0DP25 149 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 SMARCA1P28370 1054 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
SHF-210ENST00000561239 PWP2Q15269 919 aaKnown RBP15.74■□□□□ 0.11
SHF-210ENST00000561239 NSMFQ6X4W1 530 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 Q6ZUG5 572 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 FAM133AQ8N9E0 248 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 MPHOSPH6Q99547 160 aaKnown RBP15.74■□□□□ 0.11
SHF-210ENST00000561239 MYL10Q9BUA6 226 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 ALDH8A1Q9H2A2 487 aaPredicted RBP15.74■□□□□ 0.11
SHF-210ENST00000561239 CYP39A1Q9NYL5 469 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 ADD3Q9UEY8 706 aaKnown RBP15.74■□□□□ 0.11
SHF-210ENST00000561239 SLC12A7Q9Y666 1083 aa15.74■□□□□ 0.11
SHF-210ENST00000561239 DHX16O60231 1041 aaKnown RBP15.73■□□□□ 0.11
SHF-210ENST00000561239 ZNF865P0CJ78 1059 aaPredicted RBP15.73■□□□□ 0.11
SHF-210ENST00000561239 COL6A1P12109 1028 aa15.73■□□□□ 0.11
SHF-210ENST00000561239 TRAF1Q13077 416 aa15.73■□□□□ 0.11
SHF-210ENST00000561239 ACVR2BQ13705 512 aa15.73■□□□□ 0.11
SHF-210ENST00000561239 TOB2Q14106 344 aaPredicted RBP15.73■□□□□ 0.11
SHF-210ENST00000561239 CDC37Q16543 378 aaPredicted RBP15.73■□□□□ 0.11
SHF-210ENST00000561239 MUM1L1Q5H9M0 696 aa15.73■□□□□ 0.11
SHF-210ENST00000561239 NFXL1Q6ZNB6 911 aa15.73■□□□□ 0.11
SHF-210ENST00000561239 RNF180Q86T96 592 aa15.73■□□□□ 0.11
SHF-210ENST00000561239 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.73■□□□□ 0.11
SHF-210ENST00000561239 CYP46A1Q9Y6A2 500 aa15.73■□□□□ 0.11
SHF-210ENST00000561239 ABCB11O95342 1321 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 PTPDC1A2A3K4 754 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 B4DLN1 442 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 SNAI1O95863 264 aaPredicted RBP15.72■□□□□ 0.11
SHF-210ENST00000561239 KIF5BP33176 963 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 RBM25P49756 843 aaKnown RBP15.72■□□□□ 0.11
SHF-210ENST00000561239 MRPL12P52815 198 aaKnown RBP15.72■□□□□ 0.11
SHF-210ENST00000561239 ARMCX2Q7L311 632 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 CCDC144CPQ8IYA2 1237 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 FANCBQ8NB91 859 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 RGS22Q8NE09 1264 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
SHF-210ENST00000561239 NUP133Q8WUM0 1156 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 BRF1Q92994 677 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 KIF2CQ99661 725 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 UPF3BQ9BZI7 483 aaKnown RBP15.72■□□□□ 0.11
SHF-210ENST00000561239 XPNPEP3Q9NQH7 507 aa15.72■□□□□ 0.11
SHF-210ENST00000561239 FAM217BQ9NTX9 383 aaPredicted RBP15.72■□□□□ 0.11
SHF-210ENST00000561239 ZHX1Q9UKY1 873 aaPredicted RBP15.72■□□□□ 0.11
SHF-210ENST00000561239 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms