RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 FBXO16Q8IX29 292 aaPredicted RBP31.92■■■□□ 2.7
SNRPA1-215ENST00000561187 RNPC3Q96LT9 517 aaKnown RBP31.92■■■□□ 2.7
SNRPA1-215ENST00000561187 TMEM47Q9BQJ4 181 aa31.92■■■□□ 2.7
SNRPA1-215ENST00000561187 UPF3AQ9H1J1 476 aaKnown RBP31.92■■■□□ 2.7
SNRPA1-215ENST00000561187 LCTP09848 1927 aa31.91■■■□□ 2.7
SNRPA1-215ENST00000561187 CST5P28325 142 aaPredicted RBP31.91■■■□□ 2.7
SNRPA1-215ENST00000561187 GJA9P57773 515 aa31.91■■■□□ 2.7
SNRPA1-215ENST00000561187 ANKRD33Q7Z3H0 272 aa31.91■■■□□ 2.7
SNRPA1-215ENST00000561187 PCSK9Q8NBP7 692 aaKnown RBP31.91■■■□□ 2.7
SNRPA1-215ENST00000561187 CDH23Q9H251 3354 aa31.9■■■□□ 2.7
SNRPA1-215ENST00000561187 FGRP09769 529 aa31.9■■■□□ 2.7
SNRPA1-215ENST00000561187 TNFAIP2Q03169 654 aa31.9■■■□□ 2.7
SNRPA1-215ENST00000561187 FPGSQ05932 587 aa31.9■■■□□ 2.7
SNRPA1-215ENST00000561187 SYDE2Q5VT97 1194 aa31.9■■■□□ 2.7
SNRPA1-215ENST00000561187 CYP39A1Q9NYL5 469 aa31.9■■■□□ 2.7
SNRPA1-215ENST00000561187 ASB14A6NK59 587 aa31.89■■■□□ 2.7
SNRPA1-215ENST00000561187 TOP1P11387 765 aaKnown RBP31.89■■■□□ 2.7
SNRPA1-215ENST00000561187 NOVP48745 357 aa31.89■■■□□ 2.7
SNRPA1-215ENST00000561187 PDGFCQ9NRA1 345 aa31.89■■■□□ 2.7
SNRPA1-215ENST00000561187 UNC80Q8N2C7 3258 aa31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 DLL1O00548 723 aa31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 CTAGE5O15320 804 aa31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 ICAM1P05362 532 aa31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 FAM109BQ6ICB4 259 aaPredicted RBP31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 TLK2Q86UE8 772 aa31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 TOX2Q96NM4 488 aa31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 RANBP17Q9H2T7 1088 aaKnown RBP31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 EYSQ5T1H1 3165 aa31.88■■■□□ 2.69
SNRPA1-215ENST00000561187 NEDD4P46934 1319 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 A0A0U1RQG5 324 aaPredicted RBP31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 NFIBO00712 420 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 IGHDP01880 384 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 TMEM63BQ5T3F8 832 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 SMC5Q8IY18 1101 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 EXOC6Q8TAG9 804 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 ZKSCAN3Q9BRR0 538 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 PPP1R12CQ9BZL4 782 aa31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 RWDD1Q9H446 243 aaPredicted RBP31.87■■■□□ 2.69
SNRPA1-215ENST00000561187 ELP1O95163 1332 aa31.86■■■□□ 2.69
SNRPA1-215ENST00000561187 ZMYM6O95789 1325 aa31.86■■■□□ 2.69
SNRPA1-215ENST00000561187 SDSP20132 328 aa31.86■■■□□ 2.69
SNRPA1-215ENST00000561187 CXCL17Q6UXB2 119 aa31.86■■■□□ 2.69
SNRPA1-215ENST00000561187 MFSD6Q6ZSS7 791 aa31.86■■■□□ 2.69
SNRPA1-215ENST00000561187 CHD1LQ86WJ1 897 aa31.86■■■□□ 2.69
SNRPA1-215ENST00000561187 TBX21Q9UL17 535 aa31.86■■■□□ 2.69
SNRPA1-215ENST00000561187 PDHBP11177 359 aa31.85■■■□□ 2.69
SNRPA1-215ENST00000561187 SMPD1P17405 629 aa31.85■■■□□ 2.69
SNRPA1-215ENST00000561187 BAATQ14032 418 aaPredicted RBP31.85■■■□□ 2.69
SNRPA1-215ENST00000561187 AKNAD1Q5T1N1 836 aa31.85■■■□□ 2.69
SNRPA1-215ENST00000561187 PLEKHM2Q8IWE5 1019 aa31.85■■■□□ 2.69
SNRPA1-215ENST00000561187 MROH7Q68CQ1 1323 aa31.84■■■□□ 2.69
SNRPA1-215ENST00000561187 PTPDC1A2A3K4 754 aa31.84■■■□□ 2.69
SNRPA1-215ENST00000561187 ARVCFO00192 962 aa31.84■■■□□ 2.69
SNRPA1-215ENST00000561187 DYNC1LI2O43237 492 aaPredicted RBP31.84■■■□□ 2.69
SNRPA1-215ENST00000561187 CWC27Q6UX04 472 aaKnown RBP31.84■■■□□ 2.69
SNRPA1-215ENST00000561187 SLC30A10Q6XR72 485 aa31.84■■■□□ 2.69
SNRPA1-215ENST00000561187 GNEQ9Y223 722 aaKnown RBP31.84■■■□□ 2.69
SNRPA1-215ENST00000561187 TIMP1P01033 207 aa31.83■■■□□ 2.69
SNRPA1-215ENST00000561187 BTNL9Q6UXG8 535 aa31.83■■■□□ 2.69
SNRPA1-215ENST00000561187 TTYH1Q9H313 450 aaPredicted RBP31.83■■■□□ 2.69
SNRPA1-215ENST00000561187 TCP11L1Q9NUJ3 509 aa31.83■■■□□ 2.69
SNRPA1-215ENST00000561187 CDK7P50613 346 aa31.82■■■□□ 2.68
SNRPA1-215ENST00000561187 SMAD3P84022 425 aaKnown RBP31.82■■■□□ 2.68
SNRPA1-215ENST00000561187 FSCN1Q16658 493 aaKnown RBP31.82■■■□□ 2.68
SNRPA1-215ENST00000561187 CDX2Q99626 313 aaPredicted RBP31.82■■■□□ 2.68
SNRPA1-215ENST00000561187 AP5M1Q9H0R1 490 aa31.82■■■□□ 2.68
SNRPA1-215ENST00000561187 CPVLQ9H3G5 476 aa31.82■■■□□ 2.68
SNRPA1-215ENST00000561187 DIAPH3Q9NSV4 1193 aa31.82■■■□□ 2.68
SNRPA1-215ENST00000561187 GOLGA8HP0CJ92 632 aa31.81■■■□□ 2.68
SNRPA1-215ENST00000561187 CALML3P27482 149 aa31.81■■■□□ 2.68
SNRPA1-215ENST00000561187 NUCB1Q02818 461 aa31.81■■■□□ 2.68
SNRPA1-215ENST00000561187 TAPT1Q6NXT6 567 aa31.81■■■□□ 2.68
SNRPA1-215ENST00000561187 FAM126BQ8IXS8 530 aa31.81■■■□□ 2.68
SNRPA1-215ENST00000561187 SEMA6BQ9H3T3 888 aa31.81■■■□□ 2.68
SNRPA1-215ENST00000561187 LAMA4Q16363 1823 aa31.8■■■□□ 2.68
SNRPA1-215ENST00000561187 ALDH5A1P51649 535 aaPredicted RBP31.8■■■□□ 2.68
SNRPA1-215ENST00000561187 ZNF543Q08ER8 600 aa31.8■■■□□ 2.68
SNRPA1-215ENST00000561187 KIAA1211Q6ZU35 1233 aa31.8■■■□□ 2.68
SNRPA1-215ENST00000561187 MYLIPQ8WY64 445 aa31.8■■■□□ 2.68
SNRPA1-215ENST00000561187 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.8■■■□□ 2.68
SNRPA1-215ENST00000561187 TLR3O15455 904 aaKnown RBP31.79■■■□□ 2.68
SNRPA1-215ENST00000561187 MFAP1P55081 439 aaKnown RBP31.79■■■□□ 2.68
SNRPA1-215ENST00000561187 PSMC6P62333 389 aa31.79■■■□□ 2.68
SNRPA1-215ENST00000561187 RNF41Q9H4P4 317 aaPredicted RBP31.79■■■□□ 2.68
SNRPA1-215ENST00000561187 CUL9Q8IWT3 2517 aa31.79■■■□□ 2.68
SNRPA1-215ENST00000561187 ACRP10323 421 aa31.78■■■□□ 2.68
SNRPA1-215ENST00000561187 CSF2RAP15509 400 aa31.78■■■□□ 2.68
SNRPA1-215ENST00000561187 USH1GQ495M9 461 aa31.78■■■□□ 2.68
SNRPA1-215ENST00000561187 MFSD5Q6N075 450 aa31.78■■■□□ 2.68
SNRPA1-215ENST00000561187 ESR2Q92731 530 aa31.78■■■□□ 2.68
SNRPA1-215ENST00000561187 VTA1Q9NP79 307 aa31.78■■■□□ 2.68
SNRPA1-215ENST00000561187 ZNF213O14771 459 aa31.77■■■□□ 2.68
SNRPA1-215ENST00000561187 CYP2C18P33260 490 aa31.77■■■□□ 2.68
SNRPA1-215ENST00000561187 AAMPQ13685 434 aa31.77■■■□□ 2.68
SNRPA1-215ENST00000561187 CLEC4DQ8WXI8 215 aa31.77■■■□□ 2.68
SNRPA1-215ENST00000561187 ADD3Q9UEY8 706 aaKnown RBP31.77■■■□□ 2.68
SNRPA1-215ENST00000561187 KDM4AO75164 1064 aa31.76■■■□□ 2.67
SNRPA1-215ENST00000561187 NKX3-2P78367 333 aa31.76■■■□□ 2.67
SNRPA1-215ENST00000561187 PPIGQ13427 754 aaKnown RBP eCLIP31.76■■■□□ 2.67
SNRPA1-215ENST00000561187 ITGA7Q13683 1181 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms