RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 FAM161BQ96MY7 647 aa16.48■□□□□ 0.23
USP8-215ENST00000560982 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
USP8-215ENST00000560982 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
USP8-215ENST00000560982 CYP39A1Q9NYL5 469 aa16.48■□□□□ 0.23
USP8-215ENST00000560982 MROH7Q68CQ1 1323 aa16.47■□□□□ 0.23
USP8-215ENST00000560982 LCTP09848 1927 aa16.47■□□□□ 0.23
USP8-215ENST00000560982 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.47■□□□□ 0.23
USP8-215ENST00000560982 ICAM1P05362 532 aa16.47■□□□□ 0.23
USP8-215ENST00000560982 SLC16A2P36021 539 aa16.47■□□□□ 0.23
USP8-215ENST00000560982 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
USP8-215ENST00000560982 NSMFQ6X4W1 530 aa16.47■□□□□ 0.23
USP8-215ENST00000560982 NOL8Q76FK4 1167 aaKnown RBP16.47■□□□□ 0.23
USP8-215ENST00000560982 VTI1AQ96AJ9 217 aa16.47■□□□□ 0.23
USP8-215ENST00000560982 RANBP17Q9H2T7 1088 aaKnown RBP16.47■□□□□ 0.23
USP8-215ENST00000560982 ASTN1O14525 1302 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 FRMPD2Q68DX3 1309 aaPredicted RBP16.46■□□□□ 0.23
USP8-215ENST00000560982 A0A0U1RQG5 324 aaPredicted RBP16.46■□□□□ 0.23
USP8-215ENST00000560982 SDSP20132 328 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 EPHB4P54760 987 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
USP8-215ENST00000560982 FPGSQ05932 587 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 SYDE2Q5VT97 1194 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 BTNL9Q6UXG8 535 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 GUCD1Q96NT3 240 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
USP8-215ENST00000560982 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
USP8-215ENST00000560982 ARVCFO00192 962 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 CTAGE5O15320 804 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 IGHDP01880 384 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 PCP11498 1178 aaKnown RBP16.45■□□□□ 0.22
USP8-215ENST00000560982 CDK7P50613 346 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 NKX3-2P78367 333 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 SMAD3P84022 425 aaKnown RBP16.45■□□□□ 0.22
USP8-215ENST00000560982 BEX3Q00994 111 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 TLK2Q86UE8 772 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 PLEKHM2Q8IWE5 1019 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
USP8-215ENST00000560982 TBX21Q9UL17 535 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 GNEQ9Y223 722 aaKnown RBP16.45■□□□□ 0.22
USP8-215ENST00000560982 LAMA4Q16363 1823 aa16.45■□□□□ 0.22
USP8-215ENST00000560982 TIMP1P01033 207 aa16.44■□□□□ 0.22
USP8-215ENST00000560982 PDHBP11177 359 aa16.44■□□□□ 0.22
USP8-215ENST00000560982 NUCB1Q02818 461 aa16.44■□□□□ 0.22
USP8-215ENST00000560982 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
USP8-215ENST00000560982 FBXO16Q8IX29 292 aaPredicted RBP16.44■□□□□ 0.22
USP8-215ENST00000560982 TTC14Q96N46 770 aa16.44■□□□□ 0.22
USP8-215ENST00000560982 PURBQ96QR8 312 aaKnown RBP16.44■□□□□ 0.22
USP8-215ENST00000560982 OSBPL3Q9H4L5 887 aa16.44■□□□□ 0.22
USP8-215ENST00000560982 RNF41Q9H4P4 317 aaPredicted RBP16.44■□□□□ 0.22
USP8-215ENST00000560982 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
USP8-215ENST00000560982 NFIBO00712 420 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 TLR3O15455 904 aaKnown RBP16.43■□□□□ 0.22
USP8-215ENST00000560982 SMPD1P17405 629 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 KCNA4P22459 653 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 BAATQ14032 418 aaPredicted RBP16.43■□□□□ 0.22
USP8-215ENST00000560982 IQSEC1Q6DN90 963 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 TAPT1Q6NXT6 567 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 EXOC6Q8TAG9 804 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 ESR2Q92731 530 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 AP5M1Q9H0R1 490 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 DIAPH3Q9NSV4 1193 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
USP8-215ENST00000560982 NEDD4P46934 1319 aa16.43■□□□□ 0.22
USP8-215ENST00000560982 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 DLL1O00548 723 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 ZNF213O14771 459 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 DYNC1LI2O43237 492 aaPredicted RBP16.42■□□□□ 0.22
USP8-215ENST00000560982 CABYRO75952 493 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 PTGS1P23219 599 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 ALDH5A1P51649 535 aaPredicted RBP16.42■□□□□ 0.22
USP8-215ENST00000560982 ZNF543Q08ER8 600 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
USP8-215ENST00000560982 MFSD5Q6N075 450 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 CWC27Q6UX04 472 aaKnown RBP16.42■□□□□ 0.22
USP8-215ENST00000560982 CXCL17Q6UXB2 119 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 FAM126BQ8IXS8 530 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 MORC4Q8TE76 937 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 ZKSCAN3Q9BRR0 538 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 SEMA6BQ9H3T3 888 aa16.42■□□□□ 0.22
USP8-215ENST00000560982 ZEB2O60315 1214 aa16.41■□□□□ 0.22
USP8-215ENST00000560982 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
USP8-215ENST00000560982 PPIGQ13427 754 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP8-215ENST00000560982 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
USP8-215ENST00000560982 KIAA1211Q6ZU35 1233 aa16.41■□□□□ 0.22
USP8-215ENST00000560982 PNMA2Q9UL42 364 aa16.41■□□□□ 0.22
USP8-215ENST00000560982 Q9Y3F1 56 aa16.41■□□□□ 0.22
USP8-215ENST00000560982 A0A0C4DFX4 3053 aa16.4■□□□□ 0.22
USP8-215ENST00000560982 LOC102724159A0A0B4J2E5 919 aa16.4■□□□□ 0.22
USP8-215ENST00000560982 HIP1O00291 1037 aa16.4■□□□□ 0.22
USP8-215ENST00000560982 CALML3P27482 149 aa16.4■□□□□ 0.22
USP8-215ENST00000560982 ITGA7Q13683 1181 aa16.4■□□□□ 0.22
USP8-215ENST00000560982 PWP2Q15269 919 aaKnown RBP16.4■□□□□ 0.22
USP8-215ENST00000560982 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
USP8-215ENST00000560982 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
USP8-215ENST00000560982 RNF207Q6ZRF8 634 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms