RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
CTDSPL2-209ENST00000560620 FRMPD3Q5JV73 1810 aa15.12■□□□□ 0.01
CTDSPL2-209ENST00000560620 CCDC69A6NI79 296 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 ASB14A6NK59 587 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 AKR1A1P14550 325 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 ANTXR2P58335 489 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 BAATQ14032 418 aaPredicted RBP15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 MAMDC4Q6UXC1 1216 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 RNF207Q6ZRF8 634 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 STAG2Q8N3U4 1231 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 SENP6Q9GZR1 1112 aaPredicted RBP15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 ABHD16BQ9H3Z7 469 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 SENP2Q9HC62 589 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 FAM184BQ9ULE4 1060 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 WDR19Q8NEZ3 1342 aa15.11■□□□□ 0.01
CTDSPL2-209ENST00000560620 SMCHD1A6NHR9 2005 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 SNAI1O95863 264 aaPredicted RBP15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 ZNF865P0CJ78 1059 aaPredicted RBP15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 ACVR2BQ13705 512 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 QRICH1Q2TAL8 776 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 FBXO11Q86XK2 927 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 HOMER1Q86YM7 354 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 FAM133AQ8N9E0 248 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 CTCFLQ8NI51 663 aaPredicted RBP15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 IGDCC4Q8TDY8 1250 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 TMEM87BQ96K49 555 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 JMJD4Q9H9V9 463 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 ADD3Q9UEY8 706 aaKnown RBP15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 MAD2L2Q9UI95 211 aa15.1■□□□□ 0.01
CTDSPL2-209ENST00000560620 MYH6P13533 1939 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 SOWAHBA6NEL2 793 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 H0YGN5 161 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 DNM1LO00429 736 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 PGK1P00558 417 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 GRM4Q14833 912 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 SLC30A10Q6XR72 485 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 EEPD1Q7L9B9 569 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 C7orf61Q8IZ16 206 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 TMTC2Q8N394 836 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 LENG1Q96BZ8 264 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 FGD4Q96M96 766 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 NEK1Q96PY6 1258 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 MYL10Q9BUA6 226 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 GPHNQ9NQX3 736 aaPredicted RBP15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 ABCB11O95342 1321 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 MCM3APO60318 1980 aa15.09■□□□□ 0.01
CTDSPL2-209ENST00000560620 PALM3A6NDB9 673 aaPredicted RBP15.08■□□□□ 0
CTDSPL2-209ENST00000560620 REC8O95072 547 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 ATN1P54259 1190 aaPredicted RBP15.08■□□□□ 0
CTDSPL2-209ENST00000560620 RPS6P62753 249 aaKnown RBP15.08■□□□□ 0
CTDSPL2-209ENST00000560620 FGD1P98174 961 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 KRT32Q14532 448 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 CCDC144BQ3MJ40 725 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 RNF180Q86T96 592 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 ZNF654Q8IZM8 581 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 CLEC4DQ8WXI8 215 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 PIBF1Q8WXW3 757 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 MPHOSPH6Q99547 160 aaKnown RBP15.08■□□□□ 0
CTDSPL2-209ENST00000560620 AMNQ9BXJ7 453 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 LY9Q9HBG7 655 aa15.08■□□□□ 0
CTDSPL2-209ENST00000560620 SH2B2O14492 632 aaPredicted RBP15.07■□□□□ 0
CTDSPL2-209ENST00000560620 ZBTB5O15062 677 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 KIF5BP33176 963 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 TROAPQ12815 778 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 LRRC41Q15345 812 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 SYNE3Q6ZMZ3 975 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 FERMT2Q96AC1 680 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 MTA3Q9BTC8 594 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 SPC25Q9HBM1 224 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 MRPL11Q9Y3B7 192 aaKnown RBP15.07■□□□□ 0
CTDSPL2-209ENST00000560620 PCDHA1Q9Y5I3 950 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 SLC12A7Q9Y666 1083 aa15.07■□□□□ 0
CTDSPL2-209ENST00000560620 DDX49Q9Y6V7 483 aaKnown RBP15.07■□□□□ 0
CTDSPL2-209ENST00000560620 B4DLN1 442 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 DDAH1O94760 285 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 CFBP00751 764 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 C6orf222P0C671 652 aaPredicted RBP15.06■□□□□ 0
CTDSPL2-209ENST00000560620 CALM1P0DP23 149 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 CALM2P0DP24 149 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 CALM3P0DP25 149 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 COL6A1P12109 1028 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 RXRAP19793 462 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 ADCYAP1R1P41586 468 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 ALDH5A1P51649 535 aaPredicted RBP15.06■□□□□ 0
CTDSPL2-209ENST00000560620 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
CTDSPL2-209ENST00000560620 TNFAIP2Q03169 654 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 PDE4DQ08499 809 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 RAB11FIP4Q86YS3 637 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 FBXO16Q8IX29 292 aaPredicted RBP15.06■□□□□ 0
CTDSPL2-209ENST00000560620 TCEANC2Q96MN5 208 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 PIGSQ96S52 555 aa15.06■□□□□ 0
CTDSPL2-209ENST00000560620 DUSP11O75319 330 aaKnown RBP15.05■□□□□ -0
CTDSPL2-209ENST00000560620 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
CTDSPL2-209ENST00000560620 LIFRP42702 1097 aa15.05■□□□□ -0
CTDSPL2-209ENST00000560620 TRAF1Q13077 416 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms