RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	NUDT19	A8MXV4	375 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	PRKCA	P17252	672 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	GART	P22102	1010 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	CYP4F8	P98187	520 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	CDCP2	Q5VXM1	449 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	DBX2	Q6ZNG2	339 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	FBXO33	Q7Z6M2	555 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	SP8	Q8IXZ3	490 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	MKRN2	Q9H000	416 aa	Known RBP	6.29	□□□□□ -1.4
BLM-209	ENST00000560559	FBXL21	Q9UKT6	434 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	MINPP1	Q9UNW1	487 aa		6.29	□□□□□ -1.4
BLM-209	ENST00000560559	KIAA0556	O60303	1618 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559		A0A1W2PQ27	194 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559		A0A1W2PQ64	194 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559		A0A1W2PQC6	194 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559		A0A1W2PQD8	194 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	IRS4	O14654	1257 aa	Predicted RBP	6.28	□□□□□ -1.4
BLM-209	ENST00000560559	ATE1	O95260	518 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	RAPGEF3	O95398	923 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	CELA3B	P08861	270 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	EIF4A3	P38919	411 aa	Known RBP	6.28	□□□□□ -1.4
BLM-209	ENST00000560559	KIR3DS1	Q14943	382 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	NLRC3	Q7RTR2	1065 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.28	□□□□□ -1.4
BLM-209	ENST00000560559	LDHD	Q86WU2	507 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	NUP43	Q8NFH3	380 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	ATG4C	Q96DT6	458 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	PWWP2A	Q96N64	755 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	LRRC3	Q9BY71	257 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.28	□□□□□ -1.4
BLM-209	ENST00000560559	KLHL14	Q9P2G3	628 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	FER1L4	A9Z1Z3	1794 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	UHRF1BP1L	A0JNW5	1464 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	WDR7	Q9Y4E6	1490 aa		6.28	□□□□□ -1.4
BLM-209	ENST00000560559	NCOA1	Q15788	1441 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	CCNF	P41002	786 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	6.27	□□□□□ -1.41
BLM-209	ENST00000560559	GK5	Q6ZS86	529 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	FAM129C	Q86XR2	697 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	TMEFF1	Q8IYR6	380 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	CNNM2	Q9H8M5	875 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	COPRS	Q9NQ92	184 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	GFOD1	Q9NXC2	390 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	JAG2	Q9Y219	1238 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	PCDHB12	Q9Y5F1	795 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	FANCA	O15360	1455 aa		6.27	□□□□□ -1.41
BLM-209	ENST00000560559	ARHGEF40	Q8TER5	1519 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559		A0A1W2PQ45	241 aa	Predicted RBP	6.26	□□□□□ -1.41
BLM-209	ENST00000560559		A0A1W2PQY0	241 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559	HSP90B1	P14625	803 aa	Known RBP	6.26	□□□□□ -1.41
BLM-209	ENST00000560559	MCM4	P33991	863 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559	CEBPA	P49715	358 aa	Predicted RBP	6.26	□□□□□ -1.41
BLM-209	ENST00000560559	NCKAP1L	P55160	1127 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559	TAGLN	Q01995	201 aa	Known RBP	6.26	□□□□□ -1.41
BLM-209	ENST00000560559	ERMP1	Q7Z2K6	904 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559	IGDCC3	Q8IVU1	814 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559	EHMT1	Q9H9B1	1298 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559	ERVK13-1	Q9NX77	482 aa		6.26	□□□□□ -1.41
BLM-209	ENST00000560559	KDM5B	Q9UGL1	1544 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	ZCCHC11	Q5TAX3	1644 aa	Known RBP	6.25	□□□□□ -1.41
BLM-209	ENST00000560559	GREM1	O60565	184 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	BUB1B	O60566	1050 aa	Predicted RBP	6.25	□□□□□ -1.41
BLM-209	ENST00000560559	BMP8B	P34820	402 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	CCDC27	Q2M243	656 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.25	□□□□□ -1.41
BLM-209	ENST00000560559	SEZ6	Q53EL9	994 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	SLCO6A1	Q86UG4	719 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	NAT16	Q8N8M0	369 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	LINC01356	Q8N9X3	169 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	SYT8	Q8NBV8	401 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.25	□□□□□ -1.41
BLM-209	ENST00000560559	PKNOX2	Q96KN3	472 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	SLC6A18	Q96N87	628 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	DSCC1	Q9BVC3	393 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	AP5S1	Q9NUS5	200 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	UACA	Q9BZF9	1416 aa		6.25	□□□□□ -1.41
BLM-209	ENST00000560559	SETBP1	Q9Y6X0	1596 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	ZNF205	O95201	554 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	VAV1	P15498	845 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	CRK	P46108	304 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	CLC	Q05315	142 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	APOBR	Q0VD83	1088 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.24	□□□□□ -1.41
BLM-209	ENST00000560559	ZNF428	Q96B54	188 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	EAF1	Q96JC9	268 aa	Predicted RBP	6.24	□□□□□ -1.41
BLM-209	ENST00000560559	LUC7L	Q9NQ29	371 aa	Known RBP	6.24	□□□□□ -1.41
BLM-209	ENST00000560559	KCNQ5	Q9NR82	932 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	IMPACT	Q9P2X3	320 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	ACSL6	Q9UKU0	697 aa		6.24	□□□□□ -1.41
BLM-209	ENST00000560559	TNIK	Q9UKE5	1360 aa		6.23	□□□□□ -1.41
BLM-209	ENST00000560559		A0A1W2PQJ5	194 aa		6.23	□□□□□ -1.41
BLM-209	ENST00000560559	ZC3H12D	A2A288	527 aa	Known RBP	6.23	□□□□□ -1.41
BLM-209	ENST00000560559	NME1	P15531	152 aa	Known RBP	6.23	□□□□□ -1.41
BLM-209	ENST00000560559	PFKL	P17858	780 aa		6.23	□□□□□ -1.41
BLM-209	ENST00000560559	CTSK	P43235	329 aa		6.23	□□□□□ -1.41
BLM-209	ENST00000560559	ZNF165	P49910	485 aa		6.23	□□□□□ -1.41
BLM-209	ENST00000560559	AUH	Q13825	339 aa	Known RBP	6.23	□□□□□ -1.41
BLM-209	ENST00000560559	CWF19L1	Q69YN2	538 aa	Known RBP	6.23	□□□□□ -1.41
BLM-209	ENST00000560559	ZC3H14	Q6PJT7	736 aa	Known RBP	6.23	□□□□□ -1.41
BLM-209	ENST00000560559	CRTC3	Q6UUV7	619 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms