RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SCLYQ96I15 445 aa21.26■□□□□ 0.99
TSPAN3-208ENST00000560514 COG5Q9UP83 839 aa21.26■□□□□ 0.99
TSPAN3-208ENST00000560514 ASTN1O14525 1302 aa21.26■□□□□ 0.99
TSPAN3-208ENST00000560514 CHD7Q9P2D1 2997 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 CHGBP05060 677 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 SUPT20HL2P0C7V6 817 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 ACTN1P12814 892 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 PSMC6P62333 389 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 RPAP2Q8IXW5 612 aaPredicted RBP21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 FAM133AQ8N9E0 248 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 RNF146Q9NTX7 359 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 SYNPO2Q9UMS6 1093 aa21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 ARIH1Q9Y4X5 557 aaPredicted RBP21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 PRRC2BQ5JSZ5 2229 aaKnown RBP21.25■□□□□ 0.99
TSPAN3-208ENST00000560514 XIRP2A4UGR9 3374 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 TTLL1O95922 423 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 BMP3P12645 472 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 STAT2P52630 851 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 SLFN13Q68D06 897 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 IQSEC1Q6DN90 963 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 GIMAP6Q6P9H5 292 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 LRRC47Q8N1G4 583 aaKnown RBP21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 A1CFQ9NQ94 594 aaKnown RBP21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 Q9Y3F1 56 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 MTCH2Q9Y6C9 303 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 GRIN2DO15399 1336 aa21.24■□□□□ 0.99
TSPAN3-208ENST00000560514 TMEM232C9JQI7 657 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 CA3P07451 260 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 SMPD1P17405 629 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 TKFCQ3LXA3 575 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 TMEM31Q5JXX7 168 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 EEPD1Q7L9B9 569 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 DEFB128Q7Z7B8 93 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 GMCL1P1Q8NEA9 526 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 PANK1Q8TE04 598 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 CHURC1Q8WUH1 139 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 MKL1Q969V6 931 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 CEP95Q96GE4 821 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 STRBPQ96SI9 672 aaKnown RBP21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 LRFN3Q9BTN0 628 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 CERS4Q9HA82 394 aa21.23■□□□□ 0.99
TSPAN3-208ENST00000560514 SOWAHBA6NEL2 793 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 KIF28PB7ZC32 967 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 RFXAPO00287 272 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 POU3F3P20264 500 aaPredicted RBP21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 TDO2P48775 406 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 TTLL4Q14679 1199 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 FAM160B2Q86V87 743 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 AGBL1Q96MI9 1066 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 TRERF1Q96PN7 1200 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 ALDH8A1Q9H2A2 487 aaPredicted RBP21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 EPHX3Q9H6B9 360 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 MTMR4Q9NYA4 1195 aa21.22■□□□□ 0.99
TSPAN3-208ENST00000560514 IGKV6D-41A0A0C4DH26 115 aa21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 ALAS1P13196 640 aa21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 KIAA1211Q6ZU35 1233 aa21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 FBXO16Q8IX29 292 aaPredicted RBP21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 ARNTL2Q8WYA1 636 aa21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 SLC9A7Q96T83 725 aa21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 GPHNQ9NQX3 736 aaPredicted RBP21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 PDGFCQ9NRA1 345 aa21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 POLR3EQ9NVU0 708 aa21.21■□□□□ 0.99
TSPAN3-208ENST00000560514 GSG1L2A8MUP6 293 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 PRDM1O75626 825 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 APPP05067 770 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 TSPY3P0CV98 308 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 TSPY8P0CW00 308 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 MS4A1P11836 297 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 HLA-CQ95604 372 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 REV3LO60673 3130 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 TNKSO95271 1327 aa21.2■□□□□ 0.98
TSPAN3-208ENST00000560514 CYP2C9P11712 490 aa21.19■□□□□ 0.98
TSPAN3-208ENST00000560514 SLC1A4P43007 532 aa21.19■□□□□ 0.98
TSPAN3-208ENST00000560514 PHOSPHO2Q8TCD6 241 aa21.19■□□□□ 0.98
TSPAN3-208ENST00000560514 STAG1Q8WVM7 1258 aa21.19■□□□□ 0.98
TSPAN3-208ENST00000560514 FTOQ9C0B1 505 aaKnown RBP eCLIP21.19■□□□□ 0.98
TSPAN3-208ENST00000560514 VTA1Q9NP79 307 aa21.19■□□□□ 0.98
TSPAN3-208ENST00000560514 TRMT13Q9NUP7 481 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-208ENST00000560514 LRRC37A2A6NM11 1700 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 SCN5AQ14524 2016 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 GNAT2P19087 354 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 PTGS1P23219 599 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 RFC2P35250 354 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 BRDTQ58F21 947 aaPredicted RBP21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 FAM47CQ5HY64 1035 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 TAPT1Q6NXT6 567 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 MIER1Q8N108 512 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 RETREG2Q8NC44 543 aa21.18■□□□□ 0.98
TSPAN3-208ENST00000560514 SLC3A2P08195 630 aaKnown RBP21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 MYL3P08590 195 aa21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 CPT1AP50416 773 aa21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 PDE4BQ07343 736 aa21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 DIEXFQ68CQ4 756 aaKnown RBP21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 NSMFQ6X4W1 530 aa21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 CHMP4CQ96CF2 233 aa21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 CYP39A1Q9NYL5 469 aa21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 DDX49Q9Y6V7 483 aaKnown RBP21.17■□□□□ 0.98
TSPAN3-208ENST00000560514 ZNF536O15090 1300 aa21.16■□□□□ 0.98
TSPAN3-208ENST00000560514 TLL1O43897 1013 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms