RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 TLE2Q04725 743 aa19.58■□□□□ 0.72
HMG20A-210ENST00000560498 CCSAPQ6IQ19 270 aaPredicted RBP19.58■□□□□ 0.72
HMG20A-210ENST00000560498 PURBQ96QR8 312 aaKnown RBP19.58■□□□□ 0.72
HMG20A-210ENST00000560498 LBHD1Q9BQE6 289 aaPredicted RBP19.58■□□□□ 0.72
HMG20A-210ENST00000560498 RNF41Q9H4P4 317 aaPredicted RBP19.58■□□□□ 0.72
HMG20A-210ENST00000560498 PRDM5Q9NQX1 630 aaPredicted RBP19.58■□□□□ 0.72
HMG20A-210ENST00000560498 PRKAG2Q9UGJ0 569 aa19.58■□□□□ 0.72
HMG20A-210ENST00000560498 TRIM43BA6NCK2 446 aa19.57■□□□□ 0.72
HMG20A-210ENST00000560498 HIP1O00291 1037 aa19.57■□□□□ 0.72
HMG20A-210ENST00000560498 DUSP11O75319 330 aaKnown RBP19.57■□□□□ 0.72
HMG20A-210ENST00000560498 ICAM1P05362 532 aa19.57■□□□□ 0.72
HMG20A-210ENST00000560498 GSPT1P15170 499 aaKnown RBP19.57■□□□□ 0.72
HMG20A-210ENST00000560498 ACLYP53396 1101 aa19.57■□□□□ 0.72
HMG20A-210ENST00000560498 KCNA10Q16322 511 aa19.57■□□□□ 0.72
HMG20A-210ENST00000560498 TRIM43Q96BQ3 446 aaPredicted RBP19.57■□□□□ 0.72
HMG20A-210ENST00000560498 PDLIM7Q9NR12 457 aa19.57■□□□□ 0.72
HMG20A-210ENST00000560498 CYP39A1Q9NYL5 469 aa19.57■□□□□ 0.72
HMG20A-210ENST00000560498 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.56■□□□□ 0.72
HMG20A-210ENST00000560498 ZNF543Q08ER8 600 aa19.56■□□□□ 0.72
HMG20A-210ENST00000560498 NSMFQ6X4W1 530 aa19.56■□□□□ 0.72
HMG20A-210ENST00000560498 ESR2Q92731 530 aa19.56■□□□□ 0.72
HMG20A-210ENST00000560498 TSEN34Q9BSV6 310 aaKnown RBP19.56■□□□□ 0.72
HMG20A-210ENST00000560498 DSCC1Q9BVC3 393 aa19.56■□□□□ 0.72
HMG20A-210ENST00000560498 B4E1Z4 1266 aa19.55■□□□□ 0.72
HMG20A-210ENST00000560498 KDM4AO75164 1064 aa19.55■□□□□ 0.72
HMG20A-210ENST00000560498 SNHG28P0DPA3 235 aa19.55■□□□□ 0.72
HMG20A-210ENST00000560498 ITGB8P26012 769 aa19.55■□□□□ 0.72
HMG20A-210ENST00000560498 BADQ92934 168 aa19.55■□□□□ 0.72
HMG20A-210ENST00000560498 DNAH12Q6ZR08 3092 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 MCM3APO60318 1980 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 ASB14A6NK59 587 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 NFIBO00712 420 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 CTAGE5O15320 804 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 C6orf222P0C671 652 aaPredicted RBP19.54■□□□□ 0.72
HMG20A-210ENST00000560498 GOLGA8HP0CJ92 632 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 PTGS1P23219 599 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 GJA9P57773 515 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 FAM109BQ6ICB4 259 aaPredicted RBP19.54■□□□□ 0.72
HMG20A-210ENST00000560498 DGKHQ86XP1 1220 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 UPF3AQ9H1J1 476 aaKnown RBP19.54■□□□□ 0.72
HMG20A-210ENST00000560498 CPVLQ9H3G5 476 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 STARD7Q9NQZ5 370 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 PDGFCQ9NRA1 345 aa19.54■□□□□ 0.72
HMG20A-210ENST00000560498 MOXD2PA6NHM9 499 aa19.53■□□□□ 0.72
HMG20A-210ENST00000560498 PQBP1O60828 265 aaKnown RBP19.53■□□□□ 0.72
HMG20A-210ENST00000560498 CST5P28325 142 aaPredicted RBP19.53■□□□□ 0.72
HMG20A-210ENST00000560498 BAATQ14032 418 aaPredicted RBP19.53■□□□□ 0.72
HMG20A-210ENST00000560498 TMEM63BQ5T3F8 832 aa19.53■□□□□ 0.72
HMG20A-210ENST00000560498 EEPD1Q7L9B9 569 aa19.53■□□□□ 0.72
HMG20A-210ENST00000560498 CLEC4DQ8WXI8 215 aa19.53■□□□□ 0.72
HMG20A-210ENST00000560498 UBA5Q9GZZ9 404 aa19.53■□□□□ 0.72
HMG20A-210ENST00000560498 ZSWIM5Q9P217 1185 aa19.53■□□□□ 0.72
HMG20A-210ENST00000560498 ASGR1P07306 291 aa19.52■□□□□ 0.72
HMG20A-210ENST00000560498 CLTBP09497 229 aa19.52■□□□□ 0.72
HMG20A-210ENST00000560498 COL9A1P20849 921 aa19.52■□□□□ 0.72
HMG20A-210ENST00000560498 TNFAIP2Q03169 654 aa19.52■□□□□ 0.72
HMG20A-210ENST00000560498 IMMTQ16891 758 aaKnown RBP19.52■□□□□ 0.72
HMG20A-210ENST00000560498 TAPT1Q6NXT6 567 aa19.52■□□□□ 0.72
HMG20A-210ENST00000560498 NUP133Q8WUM0 1156 aa19.52■□□□□ 0.72
HMG20A-210ENST00000560498 ANKS1AQ92625 1134 aa19.52■□□□□ 0.72
HMG20A-210ENST00000560498 GNEQ9Y223 722 aaKnown RBP19.52■□□□□ 0.72
HMG20A-210ENST00000560498 SMPD1P17405 629 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 BEX3Q00994 111 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 FAAP100Q0VG06 881 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 SHHQ15465 462 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 GNASQ5JWF2 1037 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 C9orf50Q5SZB4 431 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 NOL8Q76FK4 1167 aaKnown RBP19.51■□□□□ 0.71
HMG20A-210ENST00000560498 IQCA1Q86XH1 822 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 FBXO16Q8IX29 292 aaPredicted RBP19.51■□□□□ 0.71
HMG20A-210ENST00000560498 ENAHQ8N8S7 591 aaPredicted RBP19.51■□□□□ 0.71
HMG20A-210ENST00000560498 PNMA1Q8ND90 353 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 ZSCAN10Q96SZ4 725 aaPredicted RBP19.51■□□□□ 0.71
HMG20A-210ENST00000560498 SPC25Q9HBM1 224 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 CTNNA3Q9UI47 895 aa19.51■□□□□ 0.71
HMG20A-210ENST00000560498 PTPDC1A2A3K4 754 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 KIAA0355O15063 1070 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 NKX3-2P78367 333 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 SLC30A10Q6XR72 485 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 ANKRD33Q7Z3H0 272 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 PCSK9Q8NBP7 692 aaKnown RBP19.5■□□□□ 0.71
HMG20A-210ENST00000560498 MORC4Q8TE76 937 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 GLT1D1Q96MS3 346 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 TMEM39AQ9NV64 488 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 LTBP2Q14767 1821 aa19.5■□□□□ 0.71
HMG20A-210ENST00000560498 DYNC1LI2O43237 492 aaPredicted RBP19.49■□□□□ 0.71
HMG20A-210ENST00000560498 CHMLP26374 656 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 CALML3P27482 149 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 CDK7P50613 346 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 ALDH5A1P51649 535 aaPredicted RBP19.49■□□□□ 0.71
HMG20A-210ENST00000560498 CCDC178Q5BJE1 867 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 GPATCH4Q5T3I0 446 aaKnown RBP19.49■□□□□ 0.71
HMG20A-210ENST00000560498 VTI1AQ96AJ9 217 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 TOX2Q96NM4 488 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 KAT14Q9H8E8 782 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 ELP1O95163 1332 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 TNKSO95271 1327 aa19.49■□□□□ 0.71
HMG20A-210ENST00000560498 DCDC2CA8MYV0 355 aa19.48■□□□□ 0.71
HMG20A-210ENST00000560498 NT5C2P49902 561 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms