RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 CNTN2Q02246 1040 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 C16orf59Q7L2K0 433 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 TLK2Q86UE8 772 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 ASB2Q96Q27 587 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 UHRF1Q96T88 793 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 LRRCC1Q9C099 1032 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 UPF3AQ9H1J1 476 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 SLC38A10Q9HBR0 1119 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
CDC42BPB-207ENST00000560492 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 LRRC37A2A6NM11 1700 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 TMEM232C9JQI7 657 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 ATP2A1O14983 1001 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 TTLL1O95922 423 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 TSPY3P0CV98 308 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 TSPY8P0CW00 308 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 BMP3P12645 472 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 ALAS1P13196 640 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 SBK1Q52WX2 424 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 PPP2R2DQ66LE6 453 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 SLFN13Q68D06 897 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 CEP95Q96GE4 821 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 GPATCH3Q96I76 525 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 CHMP4BQ9H444 224 aaKnown RBP12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 RNF146Q9NTX7 359 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 RAPGEFL1Q9UHV5 662 aa12.49□□□□□ -0.41
CDC42BPB-207ENST00000560492 UMODL1Q5DID0 1318 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 ASB14A6NK59 587 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 DYNC1LI2O43237 492 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 STAT2P52630 851 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 RABGGTBP53611 331 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 FSCN1Q16658 493 aaKnown RBP12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 EEPD1Q7L9B9 569 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 SIRT2Q8IXJ6 389 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 HERVK_113Q902F9 699 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 SLC4A7Q9Y6M7 1214 aa12.48□□□□□ -0.41
CDC42BPB-207ENST00000560492 GPAA1O43292 621 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 CABYRO75952 493 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 OAZ1P54368 228 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 PDE4BQ07343 736 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 ADGRE1Q14246 886 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 RASIP1Q5U651 963 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 GIMAP6Q6P9H5 292 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 RPUSD2Q8IZ73 545 aaKnown RBP12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 CHURC1Q8WUH1 139 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 APPBP2Q92624 585 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 FGD4Q96M96 766 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 NACAP1Q9BZK3 213 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 TRPV6Q9H1D0 765 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 MTMR4Q9NYA4 1195 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 SCN5AQ14524 2016 aa12.47□□□□□ -0.41
CDC42BPB-207ENST00000560492 CD4P01730 458 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 FDX1P10109 184 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 GNAT2P19087 354 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 PTGS1P23219 599 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 SLC1A4P43007 532 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 SNAP25P60880 206 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 PSMC6P62333 389 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 FAM47CQ5HY64 1035 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 NSMFQ6X4W1 530 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 FBXO16Q8IX29 292 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 KBTBD3Q8NAB2 608 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 GMCL1P1Q8NEA9 526 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 OSBP2Q969R2 916 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 SCLYQ96I15 445 aa12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 A1CFQ9NQ94 594 aaKnown RBP12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 DDX49Q9Y6V7 483 aaKnown RBP12.46□□□□□ -0.41
CDC42BPB-207ENST00000560492 ASTN1O14525 1302 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 SOWAHBA6NEL2 793 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 M0R2C6 588 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 RNF113AO15541 343 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 B4GALT4O60513 344 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 MYOGP15173 224 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 MCCP23508 829 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 TFAP4Q01664 338 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 CCDC96Q2M329 555 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 LRRFIP1Q32MZ4 808 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 DIEXFQ68CQ4 756 aaKnown RBP12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 KIAA1211Q6ZU35 1233 aa12.45□□□□□ -0.42
CDC42BPB-207ENST00000560492 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms