RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 APBA2Q99767 749 aa18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 UPF2Q9HAU5 1272 aaKnown RBP18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 FAM217BQ9NTX9 383 aaPredicted RBP18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 RBM28Q9NW13 759 aaKnown RBP18.01■□□□□ 0.47
LYSMD2-204ENST00000560491 NFIBO00712 420 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 ZBTB5O15062 677 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
LYSMD2-204ENST00000560491 NEK4P51957 841 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 RCAN1P53805 252 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 AK2P54819 239 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 EVCP57679 992 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 DPP9Q86TI2 863 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 FBXO11Q86XK2 927 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 ABRAQ8N0Z2 381 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 ANKRD35Q8N283 1001 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 TRIB2Q92519 343 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 LZTS2Q9BRK4 669 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 FBXO40Q9UH90 709 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 NID2Q14112 1375 aa18■□□□□ 0.47
LYSMD2-204ENST00000560491 CNTNAP5Q8WYK1 1306 aa17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 hCG_1642624A0A1W2PR95 340 aa17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 GRK4P32298 578 aa17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 ADD1P35611 737 aaKnown RBP17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 SLAIN1Q8ND83 568 aa17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 CLEC4DQ8WXI8 215 aa17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 ABHD8Q96I13 439 aa17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 A1CFQ9NQ94 594 aaKnown RBP17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 FLRT1Q9NZU1 646 aa17.99■□□□□ 0.47
LYSMD2-204ENST00000560491 HOXC6P09630 235 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 XRCC5P13010 732 aaKnown RBP17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 SMARCA1P28370 1054 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 CCT2P78371 535 aaKnown RBP17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 FUT2Q10981 343 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 TRIM32Q13049 653 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 STK3Q13188 491 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 NSMFQ6X4W1 530 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 PXYLP1Q8TE99 480 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 RRP36Q96EU6 259 aaKnown RBP17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 TBC1D32Q96NH3 1257 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 ALDH8A1Q9H2A2 487 aaPredicted RBP17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 NCOA5Q9HCD5 579 aaKnown RBP17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 PNMA2Q9UL42 364 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 ABCB11O95342 1321 aa17.98■□□□□ 0.47
LYSMD2-204ENST00000560491 DNAJC25-GNG10A0A024R161 153 aa17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 MYCP01106 439 aaPredicted RBP17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 INHAP05111 366 aa17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 ZNF792Q3KQV3 632 aa17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 ARMC5Q96C12 935 aa17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 ZNF274Q96GC6 653 aaPredicted RBP17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 PCDHA1Q9Y5I3 950 aa17.97■□□□□ 0.47
LYSMD2-204ENST00000560491 SLC30A10Q6XR72 485 aa17.96■□□□□ 0.47
LYSMD2-204ENST00000560491 MAML3Q96JK9 1138 aa17.96■□□□□ 0.47
LYSMD2-204ENST00000560491 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
LYSMD2-204ENST00000560491 CYP39A1Q9NYL5 469 aa17.96■□□□□ 0.47
LYSMD2-204ENST00000560491 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
LYSMD2-204ENST00000560491 MCM3APO60318 1980 aa17.96■□□□□ 0.47
LYSMD2-204ENST00000560491 PFASO15067 1338 aa17.96■□□□□ 0.46
LYSMD2-204ENST00000560491 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 PTPDC1A2A3K4 754 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 PPFIA3O75145 1194 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 LARGE1O95461 756 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 HMGCRP04035 888 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 CNTN2Q02246 1040 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 BAATQ14032 418 aaPredicted RBP17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 TBC1D5Q92609 795 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 ZNF333Q96JL9 665 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 FGD4Q96M96 766 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 SLC5A4Q9NY91 659 aa17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 MRPL11Q9Y3B7 192 aaKnown RBP17.95■□□□□ 0.46
LYSMD2-204ENST00000560491 POTEB2H3BUK9 544 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 OPLAHO14841 1288 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 CALML3P27482 149 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 CYP2C19P33261 490 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 MTFR1Q15390 333 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 NTRK3Q16288 839 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 GPKOWQ92917 476 aaPredicted RBP eCLIP17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 PHKBQ93100 1093 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 LRRC37A2A6NM11 1700 aa17.94■□□□□ 0.46
LYSMD2-204ENST00000560491 BRCA2P51587 3418 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 SOWAHBA6NEL2 793 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 RPS6P62753 249 aaKnown RBP17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 UBXN2AP68543 259 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 SCRN1Q12765 414 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 RABEP1Q15276 862 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 OLFML2BQ68BL8 750 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 PPP4R3CPQ6ZMV5 832 aa17.93■□□□□ 0.46
LYSMD2-204ENST00000560491 DIS3Q9Y2L1 958 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms