RNA–Protein interactions for RNA: ENST00000560460.5

RMDN3-208, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-208ENST00000560460 PLA2G6O60733 806 aa23.07■■□□□ 1.28
RMDN3-208ENST00000560460 CDX2Q99626 313 aaPredicted RBP23.07■■□□□ 1.28
RMDN3-208ENST00000560460 SEMA6BQ9H3T3 888 aa23.07■■□□□ 1.28
RMDN3-208ENST00000560460 HELLSQ9NRZ9 838 aa23.07■■□□□ 1.28
RMDN3-208ENST00000560460 ANAPC4Q9UJX5 808 aa23.07■■□□□ 1.28
RMDN3-208ENST00000560460 PRUNE2Q8WUY3 3088 aa23.06■■□□□ 1.28
RMDN3-208ENST00000560460 A0A0U1RQG5 324 aaPredicted RBP23.06■■□□□ 1.28
RMDN3-208ENST00000560460 SOWAHBA6NEL2 793 aa23.06■■□□□ 1.28
RMDN3-208ENST00000560460 ASB14A6NK59 587 aa23.06■■□□□ 1.28
RMDN3-208ENST00000560460 TNFAIP2Q03169 654 aa23.06■■□□□ 1.28
RMDN3-208ENST00000560460 RRP12Q5JTH9 1297 aaKnown RBP23.06■■□□□ 1.28
RMDN3-208ENST00000560460 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.05■■□□□ 1.28
RMDN3-208ENST00000560460 ORC4O43929 436 aa23.05■■□□□ 1.28
RMDN3-208ENST00000560460 TIMP1P01033 207 aa23.05■■□□□ 1.28
RMDN3-208ENST00000560460 BEX3Q00994 111 aa23.05■■□□□ 1.28
RMDN3-208ENST00000560460 MUM1L1Q5H9M0 696 aa23.05■■□□□ 1.28
RMDN3-208ENST00000560460 FAM227BQ96M60 508 aa23.05■■□□□ 1.28
RMDN3-208ENST00000560460 TBX21Q9UL17 535 aa23.05■■□□□ 1.28
RMDN3-208ENST00000560460 CCPG1Q9ULG6 757 aa23.05■■□□□ 1.28
RMDN3-208ENST00000560460 DDX49Q9Y6V7 483 aaKnown RBP23.05■■□□□ 1.28
RMDN3-208ENST00000560460 VCANP13611 3396 aa23.04■■□□□ 1.28
RMDN3-208ENST00000560460 A0A0D9SFI3 127 aa23.04■■□□□ 1.28
RMDN3-208ENST00000560460 ARVCFO00192 962 aa23.04■■□□□ 1.28
RMDN3-208ENST00000560460 CDK7P50613 346 aa23.04■■□□□ 1.28
RMDN3-208ENST00000560460 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.04■■□□□ 1.28
RMDN3-208ENST00000560460 DCAF4Q8WV16 495 aa23.04■■□□□ 1.28
RMDN3-208ENST00000560460 TTYH1Q9H313 450 aaPredicted RBP23.04■■□□□ 1.28
RMDN3-208ENST00000560460 LRRC37A2A6NM11 1700 aa23.04■■□□□ 1.28
RMDN3-208ENST00000560460 HIP1O00291 1037 aa23.03■■□□□ 1.28
RMDN3-208ENST00000560460 CTAGE5O15320 804 aa23.03■■□□□ 1.28
RMDN3-208ENST00000560460 ALX1Q15699 326 aa23.03■■□□□ 1.28
RMDN3-208ENST00000560460 MCMDC2Q4G0Z9 681 aa23.03■■□□□ 1.28
RMDN3-208ENST00000560460 NSMFQ6X4W1 530 aa23.03■■□□□ 1.28
RMDN3-208ENST00000560460 MYLIPQ8WY64 445 aa23.03■■□□□ 1.28
RMDN3-208ENST00000560460 CYP39A1Q9NYL5 469 aa23.03■■□□□ 1.28
RMDN3-208ENST00000560460 TLR3O15455 904 aaKnown RBP23.02■■□□□ 1.28
RMDN3-208ENST00000560460 FGAP02671 866 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 SLC16A2P36021 539 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 TTBK2Q6IQ55 1244 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 MFSD5Q6N075 450 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 EEPD1Q7L9B9 569 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 TLK2Q86UE8 772 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 PPP1R12CQ9BZL4 782 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 AP5M1Q9H0R1 490 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 ASTN1O14525 1302 aa23.02■■□□□ 1.28
RMDN3-208ENST00000560460 ICAM1P05362 532 aa23.01■■□□□ 1.27
RMDN3-208ENST00000560460 FGRP09769 529 aa23.01■■□□□ 1.27
RMDN3-208ENST00000560460 NOVP48745 357 aa23.01■■□□□ 1.27
RMDN3-208ENST00000560460 CXCL17Q6UXB2 119 aa23.01■■□□□ 1.27
RMDN3-208ENST00000560460 FBXO16Q8IX29 292 aaPredicted RBP23.01■■□□□ 1.27
RMDN3-208ENST00000560460 MAFAQ8NHW3 353 aaPredicted RBP23.01■■□□□ 1.27
RMDN3-208ENST00000560460 FRMPD2Q68DX3 1309 aaPredicted RBP23.01■■□□□ 1.27
RMDN3-208ENST00000560460 LCTP09848 1927 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 TRIM6-TRIM34B2RNG4 842 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 HSPD1P10809 573 aaKnown RBP23■■□□□ 1.27
RMDN3-208ENST00000560460 TOP1P11387 765 aaKnown RBP23■■□□□ 1.27
RMDN3-208ENST00000560460 PTGS1P23219 599 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 PDE4AP27815 886 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 HAND2P61296 217 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 NMIQ13287 307 aaPredicted RBP23■■□□□ 1.27
RMDN3-208ENST00000560460 PPIGQ13427 754 aaKnown RBP eCLIP23■■□□□ 1.275e-7■■■□□ 17.5
RMDN3-208ENST00000560460 FSCN1Q16658 493 aaKnown RBP23■■□□□ 1.27
RMDN3-208ENST00000560460 TTC22Q5TAA0 569 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 SYDE2Q5VT97 1194 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 FAM126BQ8IXS8 530 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 PURBQ96QR8 312 aaKnown RBP23■■□□□ 1.27
RMDN3-208ENST00000560460 TMEM47Q9BQJ4 181 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 BUD13Q9BRD0 619 aaKnown RBP eCLIP23■■□□□ 1.274e-6■■■□□ 15.3
RMDN3-208ENST00000560460 RANBP17Q9H2T7 1088 aaKnown RBP23■■□□□ 1.27
RMDN3-208ENST00000560460 GPCPD1Q9NPB8 672 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 PDGFCQ9NRA1 345 aa23■■□□□ 1.27
RMDN3-208ENST00000560460 GNEQ9Y223 722 aaKnown RBP23■■□□□ 1.27
RMDN3-208ENST00000560460 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.99■■□□□ 1.27
RMDN3-208ENST00000560460 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.99■■□□□ 1.27
RMDN3-208ENST00000560460 DYNC1LI2O43237 492 aaPredicted RBP22.99■■□□□ 1.27
RMDN3-208ENST00000560460 FOSL2P15408 326 aa22.99■■□□□ 1.27
RMDN3-208ENST00000560460 SMPD1P17405 629 aa22.99■■□□□ 1.27
RMDN3-208ENST00000560460 NKX3-2P78367 333 aa22.99■■□□□ 1.27
RMDN3-208ENST00000560460 ZNF589Q86UQ0 364 aaPredicted RBP22.99■■□□□ 1.27
RMDN3-208ENST00000560460 TMEM199Q8N511 208 aa22.99■■□□□ 1.27
RMDN3-208ENST00000560460 RILPL2Q969X0 211 aa22.99■■□□□ 1.27
RMDN3-208ENST00000560460 TMEM265A0A087WTH1 108 aa22.98■■□□□ 1.27
RMDN3-208ENST00000560460 ZEB2O60315 1214 aa22.98■■□□□ 1.27
RMDN3-208ENST00000560460 CABYRO75952 493 aa22.98■■□□□ 1.27
RMDN3-208ENST00000560460 CSF2RAP15509 400 aa22.98■■□□□ 1.27
RMDN3-208ENST00000560460 DNAJB2P25686 324 aa22.98■■□□□ 1.27
RMDN3-208ENST00000560460 BAATQ14032 418 aaPredicted RBP22.97■■□□□ 1.27
RMDN3-208ENST00000560460 IQSEC1Q6DN90 963 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 TAPT1Q6NXT6 567 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 BTNL9Q6UXG8 535 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 KIAA1211Q6ZU35 1233 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 VTA1Q9NP79 307 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 TCP11L1Q9NUJ3 509 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 ADD3Q9UEY8 706 aaKnown RBP22.97■■□□□ 1.27
RMDN3-208ENST00000560460 ZMYM6O95789 1325 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 CCDC171Q6TFL3 1326 aa22.97■■□□□ 1.27
RMDN3-208ENST00000560460 PTPDC1A2A3K4 754 aa22.96■■□□□ 1.27
RMDN3-208ENST00000560460 NFIBO00712 420 aa22.96■■□□□ 1.27
RMDN3-208ENST00000560460 ACRP10323 421 aa22.96■■□□□ 1.27
RMDN3-208ENST00000560460 CYP2C18P33260 490 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms