RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 GALNT17Q6IS24 598 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 GPC2Q8N158 579 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 SBF1O95248 1867 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 HOXA13P31271 388 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 STAT2P52630 851 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 KRT25Q7Z3Z0 450 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 NEK8Q86SG6 692 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 P2RX7Q99572 595 aaKnown RBP12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
SNRPA1-211ENST00000560433 PCNTO95613 3336 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 SLC37A4O43826 429 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 ASNSP08243 561 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 STX1AQ16623 288 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 CUL5Q93034 780 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 RIC8AQ9NPQ8 531 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 FAM237AA0A1B0GTK4 181 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 TECP42680 631 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 CCDC173Q0VFZ6 552 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 KARSQ15046 597 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 C9orf131Q5VYM1 1079 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
SNRPA1-211ENST00000560433 ESYT2A0FGR8 921 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 ACTN4O43707 911 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 ADCY5O95622 1261 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 TXKP42681 527 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 MAP3K10Q02779 954 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 FBXO11Q86XK2 927 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 WRNIP1Q96S55 665 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 NEMFO60524 1076 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 CLK2P49760 499 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 MDM2Q00987 491 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 MTMR2Q13614 643 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 TIGD1Q96MW7 591 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 AMNQ9BXJ7 453 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
SNRPA1-211ENST00000560433 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 hCG_1984214I3L0E3 225 aa12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 MEIS2O14770 477 aa12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 BMP15O95972 392 aa12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 MRPL12P52815 198 aaKnown RBP12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 POSTNQ15063 836 aa12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 AOPEPQ8N6M6 819 aa12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 ZNF713Q8N859 430 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 ANO10Q9NW15 660 aa12.34□□□□□ -0.43
SNRPA1-211ENST00000560433 OPLAHO14841 1288 aa12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 BMP6P22004 513 aa12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 SPP2Q13103 211 aa12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 IQCB1Q15051 598 aa12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 FCHSD1Q86WN1 690 aa12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 DHX40Q8IX18 779 aaKnown RBP12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 RASSF8Q8NHQ8 419 aa12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 TRIM44Q96DX7 344 aaPredicted RBP12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 PPP1R9BQ96SB3 815 aa12.33□□□□□ -0.43
SNRPA1-211ENST00000560433 MYH7BA7E2Y1 1941 aa12.33□□□□□ -0.44
SNRPA1-211ENST00000560433 ADM5C9JUS6 153 aa12.33□□□□□ -0.44
SNRPA1-211ENST00000560433 UBXN2AP68543 259 aa12.33□□□□□ -0.44
SNRPA1-211ENST00000560433 LRRC15Q8TF66 581 aa12.33□□□□□ -0.44
SNRPA1-211ENST00000560433 DICER1Q9UPY3 1922 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 CTNND1O60716 968 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 CFBP00751 764 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 OR52Z1P0C646 297 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 UVSSAQ2YD98 709 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 HSP90AA4PQ58FG1 418 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 ARL6IP4Q66PJ3 421 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 BTNL9Q6UXG8 535 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 PAGE5Q96GU1 130 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 PDLIM2Q96JY6 352 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 MTRQ99707 1265 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 POTEMA6NI47 508 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 BECN2A8MW95 431 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 NLRP12P59046 1061 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 CALCRLQ16602 461 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 TANGO6Q9C0B7 1094 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
SNRPA1-211ENST00000560433 COBLO75128 1261 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 DHX8Q14562 1220 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 GPR162Q16538 588 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 SMYD4Q8IYR2 804 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 CEP57L1Q8IYX8 460 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 MAN1B1Q9UKM7 699 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 ZHX2Q9Y6X8 837 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 GOLGA6L19H0YKK7 550 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 LONP1P36776 959 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-211ENST00000560433 UBA7P41226 1012 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms