RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 C19orf81C9J6K1 198 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 CAVIN2O95810 425 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 FOSP01100 380 aaPredicted RBP16.45■□□□□ 0.22
ZEB1-218ENST00000560196 FDX1P10109 184 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 EPHX2P34913 555 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 BACE1P56817 501 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 TYRO3Q06418 890 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 ZYXQ15942 572 aaKnown RBP16.45■□□□□ 0.22
ZEB1-218ENST00000560196 UVSSAQ2YD98 709 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 ZNF280CQ8ND82 737 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 PYM1Q9BRP8 204 aaKnown RBP16.45■□□□□ 0.22
ZEB1-218ENST00000560196 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 MRVI1Q9Y6F6 885 aa16.45■□□□□ 0.22
ZEB1-218ENST00000560196 IQCA1LA6NCM1 817 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 PIK3CDO00329 1044 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 MEIS2O14770 477 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 USP2O75604 605 aaPredicted RBP16.44■□□□□ 0.22
ZEB1-218ENST00000560196 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
ZEB1-218ENST00000560196 PPP4R3AQ6IN85 833 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 SASS6Q6UVJ0 657 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 CKAP2LQ8IYA6 745 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 PRPF38AQ8NAV1 312 aaKnown RBP16.44■□□□□ 0.22
ZEB1-218ENST00000560196 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 ABCB11O95342 1321 aa16.44■□□□□ 0.22
ZEB1-218ENST00000560196 SCN4AP35499 1836 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 EDIL3O43854 480 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 NEMFO60524 1076 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 OR52Z1P0C646 297 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 USP11P51784 963 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 SNAP25P60880 206 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 MAP3K9P80192 1104 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 SPP2Q13103 211 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 IL17AQ16552 155 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 UBE2SQ16763 222 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 MOXD1Q6UVY6 613 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 KRBA2Q6ZNG9 492 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 KRT26Q7Z3Y9 468 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 ZKSCAN4Q969J2 545 aaPredicted RBP16.43■□□□□ 0.22
ZEB1-218ENST00000560196 KIFC2Q96AC6 838 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 KIAA1468Q9P260 1216 aa16.43■□□□□ 0.22
ZEB1-218ENST00000560196 MRPL11Q9Y3B7 192 aaKnown RBP16.43■□□□□ 0.22
ZEB1-218ENST00000560196 VWA3AA6NCI4 1184 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 OPLAHO14841 1288 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 CCNT1O60563 726 aaKnown RBP16.42■□□□□ 0.22
ZEB1-218ENST00000560196 VCAM1P19320 739 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 MTMR2Q13614 643 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 SPECC1Q5M775 1068 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 SYMPKQ92797 1274 aaKnown RBP16.42■□□□□ 0.22
ZEB1-218ENST00000560196 CCDC34Q96HJ3 373 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 AK8Q96MA6 479 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 ANO3Q9BYT9 981 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 TAF1DQ9H5J8 278 aaPredicted RBP16.42■□□□□ 0.22
ZEB1-218ENST00000560196 FBXO28Q9NVF7 368 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
ZEB1-218ENST00000560196 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
ZEB1-218ENST00000560196 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 PHIPQ8WWQ0 1821 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 POLR2AP24928 1970 aaKnown RBP16.41■□□□□ 0.22
ZEB1-218ENST00000560196 CYP3A7-CYP3A51PA0A087WV96 503 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
ZEB1-218ENST00000560196 ICAM1P05362 532 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 CYP3A7P24462 503 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 STX1AQ16623 288 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
ZEB1-218ENST00000560196 SAMD3Q8N6K7 520 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 CNNM3Q8NE01 707 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
ZEB1-218ENST00000560196 CRYGNQ8WXF5 182 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 MBOAT7Q96N66 472 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 MTMR9Q96QG7 549 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 TUBE1Q9UJT0 475 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 ZHX2Q9Y6X8 837 aa16.41■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L15C9J2P7 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L13C9JLJ4 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L11C9JVI0 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L18D6R9N7 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L22D6RA61 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L17D6RBQ6 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L19D6RCP7 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 USP17L20D6RJB6 530 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 POLR2DO15514 142 aaKnown RBP16.4■□□□□ 0.22
ZEB1-218ENST00000560196 ACTN4O43707 911 aaKnown RBP16.4■□□□□ 0.22
ZEB1-218ENST00000560196 NF2P35240 595 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 SREBF1P36956 1147 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 TXLNAP40222 546 aa16.4■□□□□ 0.22
ZEB1-218ENST00000560196 IREB2P48200 963 aaKnown RBP16.4■□□□□ 0.22
ZEB1-218ENST00000560196 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms