RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 MICU3Q86XE3 530 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 TRMT44Q8IYL2 757 aaKnown RBP9.95□□□□□ -0.82
USP3-217ENST00000560070 ABRAQ8N0Z2 381 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 SRBD1Q8N5C6 995 aaKnown RBP9.95□□□□□ -0.82
USP3-217ENST00000560070 BRF1Q92994 677 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 MAML3Q96JK9 1138 aa9.95□□□□□ -0.82
USP3-217ENST00000560070 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
USP3-217ENST00000560070 PHIPQ8WWQ0 1821 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 SOWAHBA6NEL2 793 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 CYTH3O43739 400 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 PPFIA3O75145 1194 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 DDAH1O94760 285 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 HOXC6P09630 235 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 KIF5BP33176 963 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 FANCBQ8NB91 859 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 TRPV1Q8NER1 839 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 CLEC4DQ8WXI8 215 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 MTA3Q9BTC8 594 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■■■■■ 28.5
USP3-217ENST00000560070 A1CFQ9NQ94 594 aaKnown RBP9.94□□□□□ -0.82
USP3-217ENST00000560070 PDRG1Q9NUG6 133 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 CYP39A1Q9NYL5 469 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 CYP46A1Q9Y6A2 500 aa9.94□□□□□ -0.82
USP3-217ENST00000560070 RPTORQ8N122 1335 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 GOLGA8AA7E2F4 631 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 GOLGA8BA8MQT2 603 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 ZBTB5O15062 677 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 ZBTB43O43298 467 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 PPP1R11O60927 126 aaPredicted RBP9.93□□□□□ -0.82
USP3-217ENST00000560070 CALM1P0DP23 149 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 CALM2P0DP24 149 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 CALM3P0DP25 149 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
USP3-217ENST00000560070 GNAQP50148 359 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 CCT2P78371 535 aaKnown RBP9.93□□□□□ -0.82
USP3-217ENST00000560070 APOA5Q6Q788 366 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 NOL8Q76FK4 1167 aaKnown RBP9.93□□□□□ -0.82
USP3-217ENST00000560070 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 U2AF1L4Q8WU68 220 aaKnown RBP9.93□□□□□ -0.82
USP3-217ENST00000560070 RRP36Q96EU6 259 aaKnown RBP9.93□□□□□ -0.82
USP3-217ENST00000560070 TINF2Q9BSI4 451 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 AMNQ9BXJ7 453 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 RIOX1Q9H6W3 641 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 ZSWIM6Q9HCJ5 1215 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 MRPL11Q9Y3B7 192 aaKnown RBP9.93□□□□□ -0.82
USP3-217ENST00000560070 PCDHA1Q9Y5I3 950 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 MYH7P12883 1935 aa9.93□□□□□ -0.82
USP3-217ENST00000560070 DNAJC25-GNG10A0A024R161 153 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 PNMA6FA0A0J9YX94 578 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 DTNBO60941 627 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 SGPL1O95470 568 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 SNAI1O95863 264 aaPredicted RBP9.92□□□□□ -0.82
USP3-217ENST00000560070 CFBP00751 764 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 GJB1P08034 283 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 CDC27P30260 824 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 STK3Q13188 491 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 RTN1Q16799 776 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 C8orf34Q49A92 452 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 OLFML2BQ68BL8 750 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 SLC30A10Q6XR72 485 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 RNF207Q6ZRF8 634 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 SGMS1Q86VZ5 419 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 MAP3K14Q99558 947 aa9.92□□□□□ -0.82
USP3-217ENST00000560070 ZHX1Q9UKY1 873 aaPredicted RBP9.92□□□□□ -0.82
USP3-217ENST00000560070 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
USP3-217ENST00000560070 ABCB11O95342 1321 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 WDR19Q8NEZ3 1342 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 EPB41L2O43491 1005 aaKnown RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 GABBR2O75899 941 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 HOXA13P31271 388 aaPredicted RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 GJA8P48165 433 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 METAP2P50579 478 aaKnown RBP eCLIP9.91□□□□□ -0.82
USP3-217ENST00000560070 RPS6P62753 249 aaKnown RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 TOB2Q14106 344 aaPredicted RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 MAP3K21Q5TCX8 1036 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 TMTC3Q6ZXV5 915 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 FAM133AQ8N9E0 248 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 MTMR8Q96EF0 704 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 FGD4Q96M96 766 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 TAAR1Q96RJ0 339 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 LZTS2Q9BRK4 669 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 TM6SF1Q9BZW5 370 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 NCOA5Q9HCD5 579 aaKnown RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 FAM217BQ9NTX9 383 aaPredicted RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 SEC63Q9UGP8 760 aaKnown RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 CNPY2Q9Y2B0 182 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 DIS3Q9Y2L1 958 aaKnown RBP9.91□□□□□ -0.82
USP3-217ENST00000560070 LOC285556D6RIA3 1793 aa9.91□□□□□ -0.82
USP3-217ENST00000560070 PFASO15067 1338 aa9.9□□□□□ -0.82
USP3-217ENST00000560070 PDIA3P30101 505 aaKnown RBP9.9□□□□□ -0.82
USP3-217ENST00000560070 ACVR2BQ13705 512 aa9.9□□□□□ -0.82
USP3-217ENST00000560070 ARMCX2Q7L311 632 aa9.9□□□□□ -0.82
USP3-217ENST00000560070 HEATR3Q7Z4Q2 680 aa9.9□□□□□ -0.82
USP3-217ENST00000560070 FCHSD1Q86WN1 690 aa9.9□□□□□ -0.82
USP3-217ENST00000560070 MCF2L2Q86YR7 1114 aa9.9□□□□□ -0.82
USP3-217ENST00000560070 SYTL5Q8TDW5 730 aaPredicted RBP9.9□□□□□ -0.82
USP3-217ENST00000560070 GPKOWQ92917 476 aaPredicted RBP eCLIP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms