RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 ERCC4Q92889 916 aaPredicted RBP26.72■■□□□ 1.87
TM2D3-209ENST00000560013 KIFC2Q96AC6 838 aa26.72■■□□□ 1.87
TM2D3-209ENST00000560013 TMEM60Q9H2L4 133 aa26.72■■□□□ 1.87
TM2D3-209ENST00000560013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.71■■□□□ 1.87
TM2D3-209ENST00000560013 WDR46O15213 610 aaKnown RBP26.71■■□□□ 1.87
TM2D3-209ENST00000560013 LONP1P36776 959 aaKnown RBP26.71■■□□□ 1.87
TM2D3-209ENST00000560013 PRPHP41219 470 aa26.71■■□□□ 1.87
TM2D3-209ENST00000560013 ANO6Q4KMQ2 910 aa26.71■■□□□ 1.87
TM2D3-209ENST00000560013 DTHD1Q6ZMT9 781 aa26.71■■□□□ 1.87
TM2D3-209ENST00000560013 ZKSCAN4Q969J2 545 aaPredicted RBP26.71■■□□□ 1.87
TM2D3-209ENST00000560013 DCPSQ96C86 337 aaKnown RBP26.71■■□□□ 1.87
TM2D3-209ENST00000560013 RANBP17Q9H2T7 1088 aaKnown RBP26.71■■□□□ 1.87
TM2D3-209ENST00000560013 MYH7BA7E2Y1 1941 aa26.71■■□□□ 1.87
TM2D3-209ENST00000560013 KLRG1Q96E93 195 aa26.7■■□□□ 1.87
TM2D3-209ENST00000560013 PICK1Q9NRD5 415 aa26.7■■□□□ 1.87
TM2D3-209ENST00000560013 USP17L15C9J2P7 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L13C9JLJ4 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L11C9JVI0 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L18D6R9N7 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L22D6RA61 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L17D6RBQ6 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L19D6RCP7 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L20D6RJB6 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 NEMFO60524 1076 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L24Q0WX57 530 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 STX1AQ16623 288 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 USP17L6PQ6QN14 398 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 PDILTQ8N807 584 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 L3MBTL3Q96JM7 780 aaPredicted RBP26.7■■□□□ 1.86
TM2D3-209ENST00000560013 WDR18Q9BV38 432 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 AS3MTQ9HBK9 375 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 FZD1Q9UP38 647 aa26.7■■□□□ 1.86
TM2D3-209ENST00000560013 SSC5DA1L4H1 1573 aa26.69■■□□□ 1.86
TM2D3-209ENST00000560013 SMCHD1A6NHR9 2005 aa26.69■■□□□ 1.86
TM2D3-209ENST00000560013 CAVIN2O95810 425 aa26.69■■□□□ 1.86
TM2D3-209ENST00000560013 PTPRAP18433 802 aa26.69■■□□□ 1.86
TM2D3-209ENST00000560013 MCTP2Q6DN12 878 aa26.69■■□□□ 1.86
TM2D3-209ENST00000560013 FAM200AQ8TCP9 573 aa26.69■■□□□ 1.86
TM2D3-209ENST00000560013 MEIS2O14770 477 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 USP14P54578 494 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 FBXO28Q9NVF7 368 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 SERTAD1Q9UHV2 236 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 HOOK1Q9UJC3 728 aaKnown RBP26.68■■□□□ 1.86
TM2D3-209ENST00000560013 EDIL3O43854 480 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 OR52Z1P0C646 297 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 MTMR2Q13614 643 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 KANK3Q6NY19 840 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 SULF1Q8IWU6 871 aa26.68■■□□□ 1.86
TM2D3-209ENST00000560013 SPP2Q13103 211 aa26.67■■□□□ 1.86
TM2D3-209ENST00000560013 AP3B2Q13367 1082 aa26.67■■□□□ 1.86
TM2D3-209ENST00000560013 DNAJC25Q9H1X3 360 aa26.67■■□□□ 1.86
TM2D3-209ENST00000560013 ANO10Q9NW15 660 aa26.67■■□□□ 1.86
TM2D3-209ENST00000560013 PHIPQ8WWQ0 1821 aa26.67■■□□□ 1.86
TM2D3-209ENST00000560013 A0A087X0B3 334 aa26.66■■□□□ 1.86
TM2D3-209ENST00000560013 ZRSR1Q15695 479 aaKnown RBP26.66■■□□□ 1.86
TM2D3-209ENST00000560013 PPP4R3AQ6IN85 833 aa26.66■■□□□ 1.86
TM2D3-209ENST00000560013 CCDC174Q6PII3 467 aa26.66■■□□□ 1.86
TM2D3-209ENST00000560013 PRPF38AQ8NAV1 312 aaKnown RBP26.66■■□□□ 1.86
TM2D3-209ENST00000560013 ZNF280CQ8ND82 737 aa26.66■■□□□ 1.86
TM2D3-209ENST00000560013 ZC3H4Q9UPT8 1303 aaKnown RBP26.66■■□□□ 1.86
TM2D3-209ENST00000560013 ACTN4O43707 911 aaKnown RBP26.66■■□□□ 1.86
TM2D3-209ENST00000560013 GRIN3BO60391 1043 aa26.66■■□□□ 1.86
TM2D3-209ENST00000560013 MDM2Q00987 491 aaPredicted RBP26.66■■□□□ 1.86
TM2D3-209ENST00000560013 USP50Q70EL3 339 aaPredicted RBP26.66■■□□□ 1.86
TM2D3-209ENST00000560013 EMILIN3Q9NT22 766 aa26.66■■□□□ 1.86
TM2D3-209ENST00000560013 TUBE1Q9UJT0 475 aa26.66■■□□□ 1.86
TM2D3-209ENST00000560013 SRCAPQ6ZRS2 3230 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 OPLAHO14841 1288 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 ZNF165P49910 485 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 BACE1P56817 501 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 PNOCQ13519 176 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 NOL9Q5SY16 702 aaKnown RBP26.65■■□□□ 1.86
TM2D3-209ENST00000560013 SAMD1Q6SPF0 538 aaPredicted RBP26.65■■□□□ 1.86
TM2D3-209ENST00000560013 TEX2Q8IWB9 1127 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 DHX58Q96C10 678 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 CCDC34Q96HJ3 373 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 PYM1Q9BRP8 204 aaKnown RBP26.65■■□□□ 1.86
TM2D3-209ENST00000560013 ANO3Q9BYT9 981 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 USP25Q9UHP3 1055 aa26.65■■□□□ 1.86
TM2D3-209ENST00000560013 USP2O75604 605 aaPredicted RBP26.64■■□□□ 1.86
TM2D3-209ENST00000560013 TDP2O95551 362 aa26.64■■□□□ 1.86
TM2D3-209ENST00000560013 FOSP01100 380 aaPredicted RBP26.64■■□□□ 1.86
TM2D3-209ENST00000560013 DGKZQ13574 1117 aa26.64■■□□□ 1.86
TM2D3-209ENST00000560013 POTEDQ86YR6 584 aa26.64■■□□□ 1.86
TM2D3-209ENST00000560013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.64■■□□□ 1.862e-7■■□□□ 13.5
TM2D3-209ENST00000560013 NAP1L4Q99733 375 aaKnown RBP26.64■■□□□ 1.86
TM2D3-209ENST00000560013 SLF1Q9BQI6 1058 aa26.64■■□□□ 1.86
TM2D3-209ENST00000560013 ZHX2Q9Y6X8 837 aa26.64■■□□□ 1.86
TM2D3-209ENST00000560013 GLTPD2A6NH11 291 aa26.64■■□□□ 1.85
TM2D3-209ENST00000560013 TAL1P17542 331 aaPredicted RBP26.64■■□□□ 1.85
TM2D3-209ENST00000560013 VCAM1P19320 739 aa26.64■■□□□ 1.85
TM2D3-209ENST00000560013 TXLNAP40222 546 aa26.64■■□□□ 1.85
TM2D3-209ENST00000560013 USP11P51784 963 aa26.64■■□□□ 1.85
TM2D3-209ENST00000560013 MTMR9Q96QG7 549 aa26.64■■□□□ 1.85
TM2D3-209ENST00000560013 CBX8Q9HC52 389 aa26.64■■□□□ 1.85
TM2D3-209ENST00000560013 ADM5C9JUS6 153 aa26.63■■□□□ 1.85
TM2D3-209ENST00000560013 PIK3CDO00329 1044 aa26.63■■□□□ 1.85
TM2D3-209ENST00000560013 SLFN14P0C7P3 912 aa26.63■■□□□ 1.85
TM2D3-209ENST00000560013 GCFC2P16383 781 aaKnown RBP26.63■■□□□ 1.85
TM2D3-209ENST00000560013 EPHX2P34913 555 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms