RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 RAVER2Q9HCJ3 691 aaKnown RBP24.25■■□□□ 1.47
PSEN1-225ENST00000560005 CTDP1Q9Y5B0 961 aaPredicted RBP24.25■■□□□ 1.47
PSEN1-225ENST00000560005 GREB1LQ9C091 1923 aaPredicted RBP24.24■■□□□ 1.47
PSEN1-225ENST00000560005 ZBED4O75132 1171 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 TFF2Q03403 129 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 TSHZ3Q63HK5 1081 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 CXCL17Q6UXB2 119 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 CCDC144CPQ8IYA2 1237 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 KIFC2Q96AC6 838 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 KATNBL1Q9H079 304 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 TRANK1O15050 2925 aa24.24■■□□□ 1.47
PSEN1-225ENST00000560005 REC8O95072 547 aa24.23■■□□□ 1.47
PSEN1-225ENST00000560005 BMP1P13497 986 aa24.23■■□□□ 1.47
PSEN1-225ENST00000560005 CCL23P55773 120 aa24.23■■□□□ 1.47
PSEN1-225ENST00000560005 PPP2R2DQ66LE6 453 aa24.23■■□□□ 1.47
PSEN1-225ENST00000560005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.23■■□□□ 1.47
PSEN1-225ENST00000560005 SLC43A3Q8NBI5 491 aa24.23■■□□□ 1.47
PSEN1-225ENST00000560005 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.22■■□□□ 1.47
PSEN1-225ENST00000560005 MYOGP15173 224 aa24.22■■□□□ 1.47
PSEN1-225ENST00000560005 NKX3-2P78367 333 aa24.22■■□□□ 1.47
PSEN1-225ENST00000560005 NOL8Q76FK4 1167 aaKnown RBP24.22■■□□□ 1.47
PSEN1-225ENST00000560005 STK11IPQ8N1F8 1099 aa24.22■■□□□ 1.47
PSEN1-225ENST00000560005 C1QTNF1Q9BXJ1 281 aa24.22■■□□□ 1.47
PSEN1-225ENST00000560005 SLC38A10Q9HBR0 1119 aa24.22■■□□□ 1.47
PSEN1-225ENST00000560005 NYAP2Q9P242 653 aa24.22■■□□□ 1.47
PSEN1-225ENST00000560005 FBXO40Q9UH90 709 aa24.22■■□□□ 1.47
PSEN1-225ENST00000560005 ASTN1O14525 1302 aa24.21■■□□□ 1.47
PSEN1-225ENST00000560005 RASA1P20936 1047 aa24.21■■□□□ 1.47
PSEN1-225ENST00000560005 TNFAIP2Q03169 654 aa24.21■■□□□ 1.47
PSEN1-225ENST00000560005 UBE3CQ15386 1083 aa24.21■■□□□ 1.47
PSEN1-225ENST00000560005 CHST13Q8NET6 341 aa24.21■■□□□ 1.47
PSEN1-225ENST00000560005 RUFY2Q8WXA3 655 aa24.21■■□□□ 1.47
PSEN1-225ENST00000560005 ARPP21Q9UBL0 812 aaPredicted RBP24.21■■□□□ 1.47
PSEN1-225ENST00000560005 SLC4A7Q9Y6M7 1214 aa24.21■■□□□ 1.47
PSEN1-225ENST00000560005 SEC24BO95487 1268 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 KCNQ1P51787 676 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 MFAP1P55081 439 aaKnown RBP24.2■■□□□ 1.46
PSEN1-225ENST00000560005 CNTN2Q02246 1040 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 ITGA7Q13683 1181 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 SKIV2LQ15477 1246 aaKnown RBP24.2■■□□□ 1.46
PSEN1-225ENST00000560005 NOC4LQ9BVI4 516 aaKnown RBP24.2■■□□□ 1.46
PSEN1-225ENST00000560005 PUS7LQ9H0K6 701 aaKnown RBP24.2■■□□□ 1.46
PSEN1-225ENST00000560005 TRPV6Q9H1D0 765 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 WNT8AQ9H1J5 351 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 HOMER2Q9NSB8 354 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 CLIP2Q9UDT6 1046 aa24.2■■□□□ 1.46
PSEN1-225ENST00000560005 GRIN2DO15399 1336 aa24.19■■□□□ 1.46
PSEN1-225ENST00000560005 EPB41L2O43491 1005 aaKnown RBP24.19■■□□□ 1.46
PSEN1-225ENST00000560005 CABYRO75952 493 aa24.19■■□□□ 1.46
PSEN1-225ENST00000560005 CHMLP26374 656 aa24.19■■□□□ 1.46
PSEN1-225ENST00000560005 LRRFIP1Q32MZ4 808 aaKnown RBP24.19■■□□□ 1.46
PSEN1-225ENST00000560005 TLK2Q86UE8 772 aa24.19■■□□□ 1.46
PSEN1-225ENST00000560005 HAUS7Q99871 368 aa24.19■■□□□ 1.46
PSEN1-225ENST00000560005 MKNK2Q9HBH9 465 aa24.19■■□□□ 1.46
PSEN1-225ENST00000560005 PCDHA11Q9Y5I1 949 aa24.19■■□□□ 1.46
PSEN1-225ENST00000560005 MYH7P12883 1935 aa24.18■■□□□ 1.46
PSEN1-225ENST00000560005 ZBBXA8MT70 800 aa24.18■■□□□ 1.46
PSEN1-225ENST00000560005 B4GALT4O60513 344 aa24.18■■□□□ 1.46
PSEN1-225ENST00000560005 PTGS1P23219 599 aa24.18■■□□□ 1.46
PSEN1-225ENST00000560005 FSCN1Q16658 493 aaKnown RBP24.18■■□□□ 1.46
PSEN1-225ENST00000560005 AAK1Q2M2I8 961 aa24.18■■□□□ 1.46
PSEN1-225ENST00000560005 C22orf23Q9BZE7 217 aa24.18■■□□□ 1.46
PSEN1-225ENST00000560005 GNEQ9Y223 722 aaKnown RBP24.18■■□□□ 1.46
PSEN1-225ENST00000560005 PRRC2BQ5JSZ5 2229 aaKnown RBP24.18■■□□□ 1.46
PSEN1-225ENST00000560005 HOXD11P31277 338 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-225ENST00000560005 OAZ1P54368 228 aa24.17■■□□□ 1.46
PSEN1-225ENST00000560005 RPUSD2Q8IZ73 545 aaKnown RBP24.17■■□□□ 1.46
PSEN1-225ENST00000560005 FAM133AQ8N9E0 248 aa24.17■■□□□ 1.46
PSEN1-225ENST00000560005 SCLYQ96I15 445 aa24.17■■□□□ 1.46
PSEN1-225ENST00000560005 TBC1D32Q96NH3 1257 aa24.17■■□□□ 1.46
PSEN1-225ENST00000560005 FEM1BQ9UK73 627 aa24.17■■□□□ 1.46
PSEN1-225ENST00000560005 MYH4Q9Y623 1939 aa24.16■■□□□ 1.46
PSEN1-225ENST00000560005 ATP2A2P16615 1042 aaKnown RBP24.16■■□□□ 1.46
PSEN1-225ENST00000560005 VWCEQ96DN2 955 aa24.16■■□□□ 1.46
PSEN1-225ENST00000560005 AP5M1Q9H0R1 490 aa24.16■■□□□ 1.46
PSEN1-225ENST00000560005 ACAD9Q9H845 621 aa24.16■■□□□ 1.46
PSEN1-225ENST00000560005 DIAPH3Q9NSV4 1193 aa24.16■■□□□ 1.46
PSEN1-225ENST00000560005 IGKV6D-41A0A0C4DH26 115 aa24.15■■□□□ 1.46
PSEN1-225ENST00000560005 SOWAHBA6NEL2 793 aa24.15■■□□□ 1.46
PSEN1-225ENST00000560005 MINDY4BA8MYZ0 360 aa24.15■■□□□ 1.46
PSEN1-225ENST00000560005 RFXAPO00287 272 aa24.15■■□□□ 1.46
PSEN1-225ENST00000560005 DYNC1LI2O43237 492 aaPredicted RBP24.15■■□□□ 1.46
PSEN1-225ENST00000560005 PSMC6P62333 389 aa24.15■■□□□ 1.46
PSEN1-225ENST00000560005 SBK1Q52WX2 424 aa24.15■■□□□ 1.46
PSEN1-225ENST00000560005 LRRC47Q8N1G4 583 aaKnown RBP24.15■■□□□ 1.46
PSEN1-225ENST00000560005 ESYT1Q9BSJ8 1104 aa24.15■■□□□ 1.46
PSEN1-225ENST00000560005 DDX49Q9Y6V7 483 aaKnown RBP24.15■■□□□ 1.46
PSEN1-225ENST00000560005 ZEB2O60315 1214 aa24.14■■□□□ 1.45
PSEN1-225ENST00000560005 SMPD1P17405 629 aa24.14■■□□□ 1.45
PSEN1-225ENST00000560005 ZSCAN25Q6NSZ9 544 aa24.14■■□□□ 1.45
PSEN1-225ENST00000560005 STRBPQ96SI9 672 aaKnown RBP24.14■■□□□ 1.45
PSEN1-225ENST00000560005 SEZ6LQ9BYH1 1024 aa24.14■■□□□ 1.45
PSEN1-225ENST00000560005 A1CFQ9NQ94 594 aaKnown RBP24.14■■□□□ 1.45
PSEN1-225ENST00000560005 MTCH2Q9Y6C9 303 aa24.14■■□□□ 1.45
PSEN1-225ENST00000560005 ASB14A6NK59 587 aa24.13■■□□□ 1.45
PSEN1-225ENST00000560005 CA3P07451 260 aa24.13■■□□□ 1.45
PSEN1-225ENST00000560005 TTLL4Q14679 1199 aa24.13■■□□□ 1.45
PSEN1-225ENST00000560005 MKL1Q969V6 931 aa24.13■■□□□ 1.45
PSEN1-225ENST00000560005 CEP95Q96GE4 821 aa24.13■■□□□ 1.45
PSEN1-225ENST00000560005 AGBL1Q96MI9 1066 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms