RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 A0A0U1RQG5 324 aaPredicted RBP14.42□□□□□ -0.1
SPG11-219ENST00000559822 TRIM43BA6NCK2 446 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 SOWAHBA6NEL2 793 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 ASGR1P07306 291 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 PDHBP11177 359 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 TNFAIP2Q03169 654 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 PWP2Q15269 919 aaKnown RBP14.42□□□□□ -0.1
SPG11-219ENST00000559822 GNASQ5JWF2 1037 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 NSMFQ6X4W1 530 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 SH3RF1Q7Z6J0 888 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 IQCA1Q86XH1 822 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 EXOC6Q8TAG9 804 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 VTI1AQ96AJ9 217 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 TRIM43Q96BQ3 446 aaPredicted RBP14.42□□□□□ -0.1
SPG11-219ENST00000559822 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 CYP39A1Q9NYL5 469 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 STXBP5LQ9Y2K9 1186 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 DNAH12Q6ZR08 3092 aa14.42□□□□□ -0.1
SPG11-219ENST00000559822 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 ZEB2O60315 1214 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 CABYRO75952 493 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 IGHDP01880 384 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 SLC16A2P36021 539 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 SNAP25P60880 206 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 NKX3-2P78367 333 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 SHHQ15465 462 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 MUM1L1Q5H9M0 696 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 GPATCH4Q5T3I0 446 aaKnown RBP14.41□□□□□ -0.1
SPG11-219ENST00000559822 TTBK2Q6IQ55 1244 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 CWC27Q6UX04 472 aaKnown RBP14.41□□□□□ -0.1
SPG11-219ENST00000559822 Q7L0L9 218 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 RASGRP2Q7LDG7 609 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 TBC1D10CQ8IV04 446 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 MPHOSPH6Q99547 160 aaKnown RBP14.41□□□□□ -0.1
SPG11-219ENST00000559822 AP5M1Q9H0R1 490 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 VTA1Q9NP79 307 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 GPCPD1Q9NPB8 672 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 MTMR10Q9NXD2 777 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 LAMA4Q16363 1823 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
SPG11-219ENST00000559822 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
SPG11-219ENST00000559822 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
SPG11-219ENST00000559822 ADCY6O43306 1168 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 FPGSQ05932 587 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 ZNF543Q08ER8 600 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 FAAP100Q0VG06 881 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 ZNF697Q5TEC3 545 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 IQSEC1Q6DN90 963 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 DGKHQ86XP1 1220 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 SLC17A8Q8NDX2 589 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 DSCC1Q9BVC3 393 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 SEZ6LQ9BYH1 1024 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 CTNNA3Q9UI47 895 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 Q9Y3F1 56 aa14.4□□□□□ -0.1
SPG11-219ENST00000559822 LRRC37A2A6NM11 1700 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 PTPDC1A2A3K4 754 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 ARVCFO00192 962 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 SMAD3P84022 425 aaKnown RBP14.39□□□□□ -0.11
SPG11-219ENST00000559822 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
SPG11-219ENST00000559822 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
SPG11-219ENST00000559822 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 TLK2Q86UE8 772 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 MORC4Q8TE76 937 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 GNEQ9Y223 722 aaKnown RBP14.39□□□□□ -0.11
SPG11-219ENST00000559822 NEDD4P46934 1319 aa14.39□□□□□ -0.11
SPG11-219ENST00000559822 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.38□□□□□ -0.11
SPG11-219ENST00000559822 B4DLN1 442 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 NFIBO00712 420 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 TIMP1P01033 207 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 CDK7P50613 346 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 ALDH5A1P51649 535 aaPredicted RBP14.38□□□□□ -0.11
SPG11-219ENST00000559822 MRPL12P52815 198 aaKnown RBP14.38□□□□□ -0.11
SPG11-219ENST00000559822 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
SPG11-219ENST00000559822 FBXO16Q8IX29 292 aaPredicted RBP14.38□□□□□ -0.11
SPG11-219ENST00000559822 RNPC3Q96LT9 517 aaKnown RBP14.38□□□□□ -0.11
SPG11-219ENST00000559822 KRT23Q9C075 422 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 MAF1Q9H063 256 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 KAT14Q9H8E8 782 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 CNNM2Q9H8M5 875 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 TBX21Q9UL17 535 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 ASTN1O14525 1302 aa14.38□□□□□ -0.11
SPG11-219ENST00000559822 CTAGE5O15320 804 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 DYNC1LI2O43237 492 aaPredicted RBP14.37□□□□□ -0.11
SPG11-219ENST00000559822 KDM4AO75164 1064 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 SMPD1P17405 629 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 ITGB8P26012 769 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 BEX3Q00994 111 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 PPIGQ13427 754 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPG11-219ENST00000559822 MFSD5Q6N075 450 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 TAPT1Q6NXT6 567 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 RNF207Q6ZRF8 634 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 EEPD1Q7L9B9 569 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 PNMA1Q8ND90 353 aa14.37□□□□□ -0.11
SPG11-219ENST00000559822 ZSCAN10Q96SZ4 725 aaPredicted RBP14.37□□□□□ -0.11
SPG11-219ENST00000559822 TMEM265A0A087WTH1 108 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 CALML3P27482 149 aa14.36□□□□□ -0.11
SPG11-219ENST00000559822 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
SPG11-219ENST00000559822 DUSP28Q4G0W2 176 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms