RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 SAMD1Q6SPF0 538 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-215ENST00000559774 HOMER1Q86YM7 354 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 CCAR1Q8IX12 1150 aaKnown RBP10.02□□□□□ -0.81
LRRC28-215ENST00000559774 CPXCR1Q8N123 301 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 CMTR1Q8N1G2 835 aaKnown RBP10.02□□□□□ -0.81
LRRC28-215ENST00000559774 CCDC82Q8N4S0 544 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 CCDC148Q8NFR7 591 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 PHKBQ93100 1093 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 ERO1AQ96HE7 468 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 AGBL1Q96MI9 1066 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 TRERF1Q96PN7 1200 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 ACAD9Q9H845 621 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-215ENST00000559774 CPA4Q9UI42 421 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 PFASO15067 1338 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 A0A0G2JMZ2 1700 aa10.02□□□□□ -0.81
LRRC28-215ENST00000559774 RLFQ13129 1914 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 LOC102724159A0A0B4J2E5 919 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 SLC15A5A6NIM6 579 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 PIK3CDO00329 1044 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 PPP1R11O60927 126 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-215ENST00000559774 FCER1AP12319 257 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 ERCC3P19447 782 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 PDCP20941 246 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 CALML3P27482 149 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 HOXD10P28358 340 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 GNA11P29992 359 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 ANP32AP39687 249 aaKnown RBP10.01□□□□□ -0.81
LRRC28-215ENST00000559774 FCGRTP55899 365 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 PWP2Q15269 919 aaKnown RBP10.01□□□□□ -0.81
LRRC28-215ENST00000559774 CCDC174Q6PII3 467 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 PLEKHH3Q7Z736 793 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 BICD2Q8TD16 824 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 COA7Q96BR5 231 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 ZMYND12Q9H0C1 365 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 CWC22Q9HCG8 908 aaKnown RBP10.01□□□□□ -0.81
LRRC28-215ENST00000559774 RNF146Q9NTX7 359 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 SLC5A4Q9NY91 659 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 IVNS1ABPQ9Y6Y0 642 aa10.01□□□□□ -0.81
LRRC28-215ENST00000559774 STXBP3O00186 592 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 ALAS1P13196 640 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 FDPSP14324 419 aaKnown RBP10□□□□□ -0.81
LRRC28-215ENST00000559774 PTPREP23469 700 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 CTCFP49711 727 aaPredicted RBP10□□□□□ -0.81
LRRC28-215ENST00000559774 MRPL12P52815 198 aaKnown RBP10□□□□□ -0.81
LRRC28-215ENST00000559774 KCTD2Q14681 263 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 WWC2Q6AWC2 1192 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 HEATR3Q7Z4Q2 680 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 GPR142Q7Z601 462 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 NCAPG2Q86XI2 1143 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 FAM184AQ8NB25 1140 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 SOCS4Q8WXH5 440 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 CLEC4DQ8WXI8 215 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 ALG1Q9BT22 464 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 RNF39Q9H2S5 420 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 R3HDMLQ9H3Y0 253 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 PSTPIP2Q9H939 334 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 C6orf50Q9HD87 102 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 SMC3Q9UQE7 1217 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 DIS3Q9Y2L1 958 aaKnown RBP10□□□□□ -0.81
LRRC28-215ENST00000559774 RIPK3Q9Y572 518 aa10□□□□□ -0.81
LRRC28-215ENST00000559774 GCOM1H8Y6P7 765 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-215ENST00000559774 JAK2O60674 1132 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 FOSP01100 380 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-215ENST00000559774 HSP90AA1P07900 732 aaKnown RBP9.99□□□□□ -0.81
LRRC28-215ENST00000559774 HOXC6P09630 235 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 POLR2MP0CAP2 368 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 HSD17B4P51659 736 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 NAPAP54920 295 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 SNAP25P60880 206 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 TRIM29Q14134 588 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 GRB14Q14449 540 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 USH1GQ495M9 461 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 MORN1Q5T089 497 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
LRRC28-215ENST00000559774 ANKRD35Q8N283 1001 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 DAGLBQ8NCG7 672 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 ZNF296Q8WUU4 475 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-215ENST00000559774 CUL5Q93034 780 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 NUDT12Q9BQG2 462 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 PORCNQ9H237 461 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 EFCC1Q9HA90 598 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 RIC8AQ9NPQ8 531 aa9.99□□□□□ -0.81
LRRC28-215ENST00000559774 PARP14Q460N5 1801 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 PCNTO95613 3336 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 DNAJC25-GNG10A0A024R161 153 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 SMCO2A6NFE2 343 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 B4DLN1 442 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 TNPO2O14787 897 aaKnown RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 XRCC5P13010 732 aaKnown RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 GJB2P29033 226 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 PSMC4P43686 418 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 ADCY7P51828 1080 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 CACNB1Q02641 598 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 AP3B2Q13367 1082 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 MUM1L1Q5H9M0 696 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 RNF207Q6ZRF8 634 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 ZNF467Q7Z7K2 595 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 MSL3Q8N5Y2 521 aaKnown RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 DNERQ8NFT8 737 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms