RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 RLBP1P12271 317 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 ACTN1P12814 892 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 SMPD1P17405 629 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 RASA1P20936 1047 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-207ENST00000559734 ALYREFQ86V81 257 aaKnown RBP12.9□□□□□ -0.34
TRAF3-207ENST00000559734 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-207ENST00000559734 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAF3-207ENST00000559734 HLA-CQ95604 372 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 PDGFCQ9NRA1 345 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 TRMT13Q9NUP7 481 aaKnown RBP12.9□□□□□ -0.34
TRAF3-207ENST00000559734 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 FEM1BQ9UK73 627 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
TRAF3-207ENST00000559734 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
TRAF3-207ENST00000559734 SOWAHBA6NEL2 793 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 ASB14A6NK59 587 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 MINDY4BA8MYZ0 360 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 PFKMP08237 780 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 NKX3-2P78367 333 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 FAM47CQ5HY64 1035 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAF3-207ENST00000559734 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 AGBL1Q96MI9 1066 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
TRAF3-207ENST00000559734 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
TRAF3-207ENST00000559734 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
TRAF3-207ENST00000559734 TNKSO95271 1327 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 ARHGEF15O94989 841 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 MYL3P08590 195 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 ALAS1P13196 640 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 OAZ1P54368 228 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 TMEM63BQ5T3F8 832 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 PPP1R13LQ8WUF5 828 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 VWCEQ96DN2 955 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 SLC9A7Q96T83 725 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 SEZ6LQ9BYH1 1024 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAF3-207ENST00000559734 PUS7LQ9H0K6 701 aaKnown RBP12.88□□□□□ -0.35
TRAF3-207ENST00000559734 C11orf16Q9NQ32 467 aa12.88□□□□□ -0.35
TRAF3-207ENST00000559734 KIF28PB7ZC32 967 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 GPR37L1O60883 481 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 PRDM1O75626 825 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 SUPT20HL2P0C7V6 817 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 BMP3P12645 472 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 POU3F3P20264 500 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-207ENST00000559734 TAP1Q03518 808 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 GRB10Q13322 594 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 SLFN13Q68D06 897 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
TRAF3-207ENST00000559734 CEP95Q96GE4 821 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 UIMC1Q96RL1 719 aa12.87□□□□□ -0.35
TRAF3-207ENST00000559734 CHD9Q3L8U1 2897 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 NCOR1O75376 2440 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 SNAP25P60880 206 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 ZSCAN25Q6NSZ9 544 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 SPRED2Q7Z698 418 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 HERC6Q8IVU3 1022 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 GDPD5Q8WTR4 605 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 TRERF1Q96PN7 1200 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 HAUS7Q99871 368 aa12.86□□□□□ -0.35
TRAF3-207ENST00000559734 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-207ENST00000559734 PRRC2BQ5JSZ5 2229 aaKnown RBP12.86□□□□□ -0.35
TRAF3-207ENST00000559734 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
TRAF3-207ENST00000559734 TTLL1O95922 423 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 TDO2P48775 406 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 STAT2P52630 851 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 TAPT1Q6NXT6 567 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 NSMFQ6X4W1 530 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 RETREG2Q8NC44 543 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 PHOSPHO2Q8TCD6 241 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 PURBQ96QR8 312 aaKnown RBP12.85□□□□□ -0.35
TRAF3-207ENST00000559734 CD320Q9NPF0 282 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 MTUS1Q9ULD2 1270 aa12.85□□□□□ -0.35
TRAF3-207ENST00000559734 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 ATP5JP18859 108 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-207ENST00000559734 RFC2P35250 354 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 KCNJ6P48051 423 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 MUM1L1Q5H9M0 696 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 FAM160B2Q86V87 743 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 GMCL1P1Q8NEA9 526 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 OR6J1Q8NGC5 347 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 MTG1Q9BT17 334 aaPredicted RBP12.84□□□□□ -0.35
TRAF3-207ENST00000559734 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 VTA1Q9NP79 307 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
TRAF3-207ENST00000559734 MTMR7Q9Y216 660 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms