RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 TTC38Q5R3I4 469 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 LDLRAD1Q5T700 205 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 USP17L6PQ6QN14 398 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 ANKRD13AQ8IZ07 590 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 TANGO6Q9C0B7 1094 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 CSADQ9Y600 493 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 IRF6O14896 467 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 KCNG4Q8TDN1 519 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 CLIC6Q96NY7 704 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 FBXO2Q9UK22 296 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 PPP1R9AQ9ULJ8 1098 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 A0A0G2JMZ2 1700 aa16.34■□□□□ 0.21
RABGGTA-209ENST00000559551 CCDC194A0A1B0GVG4 234 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 SPDYE5A6NIY4 337 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 PPP6R2O75170 966 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 GJA5P36382 358 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 TTLL12Q14166 644 aaPredicted RBP16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 ADALQ6DHV7 355 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 LDHDQ86WU2 507 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 PRPF38AQ8NAV1 312 aaKnown RBP16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 PSTPIP2Q9H939 334 aa16.33■□□□□ 0.21
RABGGTA-209ENST00000559551 FLOT1O75955 427 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 TRAPPC10P48553 1259 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 TREML2Q5T2D2 321 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 CUL5Q93034 780 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 ATG4CQ96DT6 458 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 OTUD5Q96G74 571 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 SLC38A10Q9HBR0 1119 aa16.33■□□□□ 0.2
RABGGTA-209ENST00000559551 PPATQ06203 517 aa16.32■□□□□ 0.2
RABGGTA-209ENST00000559551 MOGSQ13724 837 aa16.32■□□□□ 0.2
RABGGTA-209ENST00000559551 SHC4Q6S5L8 630 aa16.32■□□□□ 0.2
RABGGTA-209ENST00000559551 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
RABGGTA-209ENST00000559551 TBCKQ8TEA7 893 aa16.32■□□□□ 0.2
RABGGTA-209ENST00000559551 ZNF408Q9H9D4 720 aa16.32■□□□□ 0.2
RABGGTA-209ENST00000559551 NOL7Q9UMY1 257 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-209ENST00000559551 NR1I2O75469 434 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 PTPREP23469 700 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 SNW1Q13573 536 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 NONOQ15233 471 aaKnown RBP eCLIP16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 IL17AQ16552 155 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 CATSPERGQ6ZRH7 1159 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 REPS2Q8NFH8 660 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 BICD2Q8TD16 824 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 TMEM60Q9H2L4 133 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 A0A1W2PQ27 194 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 A0A1W2PQ64 194 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 A0A1W2PQD8 194 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 ITGBL1O95965 494 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 MCM7P33993 719 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 ATP2C1P98194 919 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 PTGDRQ13258 359 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 ARMC9Q7Z3E5 817 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 KCNH4Q9UQ05 1017 aa16.31■□□□□ 0.2
RABGGTA-209ENST00000559551 LCTP09848 1927 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 A0A1B0GVL5 298 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 ICAM1P05362 532 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 DSG3P32926 999 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 MRPL12P52815 198 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 ZSCAN23Q3MJ62 389 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 FSIP1Q8NA03 581 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 RBM46Q8TBY0 533 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 OPTNQ96CV9 577 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 VWA5AO00534 786 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 CRYGNQ8WXF5 182 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 CLEC4DQ8WXI8 215 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 DACT1Q9NYF0 836 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 TMOD4Q9NZQ9 345 aa16.3■□□□□ 0.2
RABGGTA-209ENST00000559551 GOLGA6L4A6NEF3 574 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 GOLGA6L3A6NEY3 463 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 HOXA13P31271 388 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 NDUFA8P51970 172 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 PPIL2Q13356 520 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 CST9Q5W186 159 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 USP49Q70CQ1 688 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 NEK8Q86SG6 692 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 CPXCR1Q8N123 301 aa16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 SRPRBQ9Y5M8 271 aaKnown RBP16.29■□□□□ 0.2
RABGGTA-209ENST00000559551 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 PEX10O60683 326 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 CUTAO60888 179 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 CMA1P23946 247 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 LETM2Q2VYF4 491 aa16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 FMR1NBQ8N0W7 255 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 KRI1Q8N9T8 703 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-209ENST00000559551 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms