RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 AKNAD1Q5T1N1 836 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 ZNF697Q5TEC3 545 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 SYDE2Q5VT97 1194 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 TTBK2Q6IQ55 1244 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 BTNL9Q6UXG8 535 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 NSMFQ6X4W1 530 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 NOL8Q76FK4 1167 aaKnown RBP17.6■□□□□ 0.41
LRRC28-213ENST00000559399 RNF41Q9H4P4 317 aaPredicted RBP17.6■□□□□ 0.41
LRRC28-213ENST00000559399 MROH7Q68CQ1 1323 aa17.6■□□□□ 0.41
LRRC28-213ENST00000559399 FRMPD2Q68DX3 1309 aaPredicted RBP17.6■□□□□ 0.41
LRRC28-213ENST00000559399 ASTN1O14525 1302 aa17.59■□□□□ 0.41
LRRC28-213ENST00000559399 NKX3-2P78367 333 aa17.59■□□□□ 0.41
LRRC28-213ENST00000559399 FPGSQ05932 587 aa17.59■□□□□ 0.41
LRRC28-213ENST00000559399 TBC1D10CQ8IV04 446 aa17.59■□□□□ 0.41
LRRC28-213ENST00000559399 VTI1AQ96AJ9 217 aa17.59■□□□□ 0.41
LRRC28-213ENST00000559399 TTC14Q96N46 770 aa17.59■□□□□ 0.41
LRRC28-213ENST00000559399 OSBPL3Q9H4L5 887 aa17.59■□□□□ 0.41
LRRC28-213ENST00000559399 LTBP2Q14767 1821 aa17.58■□□□□ 0.41
LRRC28-213ENST00000559399 A0A0U1RQG5 324 aaPredicted RBP17.58■□□□□ 0.4
LRRC28-213ENST00000559399 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.58■□□□□ 0.4
LRRC28-213ENST00000559399 CTAGE5O15320 804 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 IGHDP01880 384 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 PDHBP11177 359 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 EPHB4P54760 987 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 TLK2Q86UE8 772 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 RNPC3Q96LT9 517 aaKnown RBP17.58■□□□□ 0.4
LRRC28-213ENST00000559399 GPCPD1Q9NPB8 672 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 DIAPH3Q9NSV4 1193 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 TBX21Q9UL17 535 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 PNMA2Q9UL42 364 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 COL6A3P12111 3177 aa17.58■□□□□ 0.4
LRRC28-213ENST00000559399 ARVCFO00192 962 aa17.57■□□□□ 0.4
LRRC28-213ENST00000559399 CDK7P50613 346 aa17.57■□□□□ 0.4
LRRC28-213ENST00000559399 SMAD3P84022 425 aaKnown RBP17.57■□□□□ 0.4
LRRC28-213ENST00000559399 FBXO16Q8IX29 292 aaPredicted RBP17.57■□□□□ 0.4
LRRC28-213ENST00000559399 ESR2Q92731 530 aa17.57■□□□□ 0.4
LRRC28-213ENST00000559399 FAM161BQ96MY7 647 aa17.57■□□□□ 0.4
LRRC28-213ENST00000559399 GUCD1Q96NT3 240 aa17.57■□□□□ 0.4
LRRC28-213ENST00000559399 GNEQ9Y223 722 aaKnown RBP17.57■□□□□ 0.4
LRRC28-213ENST00000559399 DDX49Q9Y6V7 483 aaKnown RBP17.57■□□□□ 0.4
LRRC28-213ENST00000559399 MYH4Q9Y623 1939 aa17.57■□□□□ 0.4
LRRC28-213ENST00000559399 NEDD4P46934 1319 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 NFIBO00712 420 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 ZNF213O14771 459 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 TIMP1P01033 207 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 SMPD1P17405 629 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 NT5C2P49902 561 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 BEX3Q00994 111 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
LRRC28-213ENST00000559399 FSCN1Q16658 493 aaKnown RBP17.56■□□□□ 0.4
LRRC28-213ENST00000559399 CWC27Q6UX04 472 aaKnown RBP17.56■□□□□ 0.4
LRRC28-213ENST00000559399 EEPD1Q7L9B9 569 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 PURBQ96QR8 312 aaKnown RBP17.56■□□□□ 0.4
LRRC28-213ENST00000559399 AP5M1Q9H0R1 490 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 VTA1Q9NP79 307 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 ADD3Q9UEY8 706 aaKnown RBP17.56■□□□□ 0.4
LRRC28-213ENST00000559399 PLXNA1Q9UIW2 1896 aa17.56■□□□□ 0.4
LRRC28-213ENST00000559399 HIP1O00291 1037 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 CABYRO75952 493 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 IQSEC1Q6DN90 963 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 TAPT1Q6NXT6 567 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 CXCL17Q6UXB2 119 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 FAM126BQ8IXS8 530 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 MORC4Q8TE76 937 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 PDGFCQ9NRA1 345 aa17.55■□□□□ 0.4
LRRC28-213ENST00000559399 WDR19Q8NEZ3 1342 aa17.54■□□□□ 0.4
LRRC28-213ENST00000559399 LOC102724159A0A0B4J2E5 919 aa17.54■□□□□ 0.4
LRRC28-213ENST00000559399 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
LRRC28-213ENST00000559399 TLR3O15455 904 aaKnown RBP17.54■□□□□ 0.4
LRRC28-213ENST00000559399 DYNC1LI2O43237 492 aaPredicted RBP17.54■□□□□ 0.4
LRRC28-213ENST00000559399 ZEB2O60315 1214 aa17.54■□□□□ 0.4
LRRC28-213ENST00000559399 ALDH5A1P51649 535 aaPredicted RBP17.54■□□□□ 0.4
LRRC28-213ENST00000559399 PWP2Q15269 919 aaKnown RBP17.54■□□□□ 0.4
LRRC28-213ENST00000559399 MFSD5Q6N075 450 aa17.54■□□□□ 0.4
LRRC28-213ENST00000559399 DGKHQ86XP1 1220 aa17.54■□□□□ 0.4
LRRC28-213ENST00000559399 Q9Y3F1 56 aa17.54■□□□□ 0.4
LRRC28-213ENST00000559399 PTGS1P23219 599 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 CCDC178Q5BJE1 867 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 GPATCH4Q5T3I0 446 aaKnown RBP17.53■□□□□ 0.4
LRRC28-213ENST00000559399 SLC30A10Q6XR72 485 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 RNF207Q6ZRF8 634 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 KIAA1211Q6ZU35 1233 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 IQCA1Q86XH1 822 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 CLEC4DQ8WXI8 215 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 ZKSCAN3Q9BRR0 538 aa17.53■□□□□ 0.4
LRRC28-213ENST00000559399 LAMA2P24043 3122 aaKnown RBP17.53■□□□□ 0.4
LRRC28-213ENST00000559399 KDM4AO75164 1064 aa17.52■□□□□ 0.4
LRRC28-213ENST00000559399 CALML3P27482 149 aa17.52■□□□□ 0.4
LRRC28-213ENST00000559399 PPIGQ13427 754 aaKnown RBP eCLIP17.52■□□□□ 0.4
LRRC28-213ENST00000559399 ITGA7Q13683 1181 aa17.52■□□□□ 0.4
LRRC28-213ENST00000559399 TMEM199Q8N511 208 aa17.52■□□□□ 0.4
LRRC28-213ENST00000559399 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.4
LRRC28-213ENST00000559399 DSCC1Q9BVC3 393 aa17.52■□□□□ 0.4
LRRC28-213ENST00000559399 PPP1R12CQ9BZL4 782 aa17.52■□□□□ 0.4
LRRC28-213ENST00000559399 SEMA6BQ9H3T3 888 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms