RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 SMAD1Q15797 465 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 FAAH2Q6GMR7 532 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 ISM2Q6H9L7 571 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 TOGARAM2Q6ZUX3 1019 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 SLFN12Q8IYM2 578 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 PPP1R14CQ8TAE6 165 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 PLEKHA5Q9HAU0 1116 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 FANCFQ9NPI8 374 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 N6AMT1Q9Y5N5 214 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 BCL9O00512 1426 aa6.56□□□□□ -1.36
CTDSPL2-206ENST00000559175 FOXN3O00409 490 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 KINO60870 393 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 GJA5P36382 358 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 NRLP54845 237 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 AKAP4Q5JQC9 854 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 SWT1Q5T5J6 900 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 C1orf53Q5VUE5 145 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 MYCT1Q8N699 235 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 CNTD1Q8N815 330 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 NAT8LQ8N9F0 302 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ATXN2LQ8WWM7 1075 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 RADILQ96JH8 1075 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 OSGEPQ9NPF4 335 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 LUC7LQ9NQ29 371 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 SEL1LQ9UBV2 794 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 SPAG9O60271 1321 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 EIF1AYO14602 144 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 AHCYL1O43865 530 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 USP17L7P0C7H9 530 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ATP1A3P13637 1013 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ATF7P17544 494 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ERMP1Q7Z2K6 904 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 NEK9Q8TD19 979 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 KIAA1586Q9HCI6 787 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ATP8A2Q9NTI2 1148 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 KANK1Q14678 1352 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 SERTM1A2A2V5 107 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 K7ENM7 598 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ABLIM3O94929 683 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 PFKPQ01813 784 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 RRP12Q5JTH9 1297 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ITPRIPL1Q6GPH6 555 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 TRAF7Q6Q0C0 670 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 IGF2-ASQ6U949 168 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 SYNE3Q6ZMZ3 975 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 ENOSF1Q7L5Y1 443 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 SYAP1Q96A49 352 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 CLIP3Q96DZ5 547 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 FAM81BQ96LP2 452 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 UIMC1Q96RL1 719 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 SLC26A6Q9BXS9 759 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 BRD9Q9H8M2 597 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 PCDHGB6Q9Y5F9 930 aa6.55□□□□□ -1.36
CTDSPL2-206ENST00000559175 PARD3Q8TEW0 1356 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 CCDC196A0A1B0GTZ2 297 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 FAM170AA1A519 330 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 FYB1O15117 783 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 FBXO24O75426 580 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 MT-CO1P00395 513 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 L1CAMP32004 1257 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 HOXD12P35452 270 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 DCTN1Q14203 1278 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 EPS8L3Q8TE67 593 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 CCDC113Q9H0I3 377 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 SIL1Q9H173 461 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 UBAP1Q9NZ09 502 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 KIF13BQ9NQT8 1826 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 ANKRD18BA2A2Z9 1011 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 RRN3P2A6NIE6 340 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 GSG1L2A8MUP6 293 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 M0R3H8 397 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 MYO1BO43795 1136 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 STIP1P31948 543 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 GBP2P32456 591 aaPredicted RBP6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 MCM2P49736 904 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 PRSS12P56730 875 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 RASGRF1Q13972 1273 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 ARMC4Q5T2S8 1044 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 SAPCD2Q86UD0 394 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 DZIP1Q86YF9 867 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 SLC41A1Q8IVJ1 513 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 GJB6O95452 261 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 MAP2K2P36507 400 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 MAP7D1Q3KQU3 841 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 DACT2Q5SW24 774 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 FKBP15Q5T1M5 1219 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 CYP26C1Q6V0L0 522 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 EPM2AIP1Q7L775 607 aaPredicted RBP6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 NKAPQ8N5F7 415 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 UROC1Q96N76 676 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 KATNAL1Q9BW62 490 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 GPR52Q9Y2T5 361 aa6.54□□□□□ -1.36
CTDSPL2-206ENST00000559175 TMEM110-MUSTN1A8MSY1 372 aa6.53□□□□□ -1.36
CTDSPL2-206ENST00000559175 C3orf80F5H4A9 247 aa6.53□□□□□ -1.36
CTDSPL2-206ENST00000559175 P4HA2O15460 535 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms