RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 GNB5O14775 395 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SHOXO15266 292 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 LRRN2O75325 713 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SLITRK5O94991 958 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 CRTAMO95727 393 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 CPP00450 1065 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 C8AP07357 584 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 CT47B1P0C2W7 299 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 C6orf222P0C671 652 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SRGAP2CP0DJJ0 459 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 PYGMP11217 842 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 ATF3P18847 181 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 GFRA1P56159 465 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SCRN1Q12765 414 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 MAP4K2Q12851 820 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 GRB10Q13322 594 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SNW1Q13573 536 aaKnown RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 COL9A3Q14050 684 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 DHCR24Q15392 516 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 TRIM61Q5EBN2 209 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 RNF219Q5W0B1 726 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 CDCA2Q69YH5 1023 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SHISA2Q6UWI4 295 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 NECAB2Q7Z6G3 386 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 ZBTB46Q86UZ6 589 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SPATS2Q86XZ4 545 aaKnown RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 CERS3Q8IU89 383 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 PPIL6Q8IXY8 311 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 ZNF513Q8N8E2 541 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SYTL5Q8TDW5 730 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 TSR2Q969E8 191 aaKnown RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 UTP4Q969X6 686 aaKnown RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 TRIM11Q96F44 468 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 FBXL18Q96ME1 805 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 ALG1Q9BT22 464 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SEMA6CQ9H3T2 930 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 PRDM5Q9NQX1 630 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 CHST7Q9NS84 486 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SAMD15Q9P1V8 674 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 RNF112Q9ULX5 631 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 ZKSCAN5Q9Y2L8 839 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 SSU72P8A0A1W2PR75 194 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 TCRBV16S1A1N1A0A5B0 115 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 F8W735 103 aaPredicted RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 H0Y8X5 98 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 MEFVO15553 781 aaPredicted RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GPR39O43194 453 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 TPD52L2O43399 206 aaKnown RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 SIGLEC6O43699 453 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 PLIN1O60240 522 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GAS7O60861 476 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 NPTXRO95502 500 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 PRAMEF1O95521 474 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 BMP3P12645 472 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 NAT1P18440 290 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 CCND1P24385 295 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 SEPHS1P49903 392 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 TBX4P57082 545 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 NMIQ13287 307 aaPredicted RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 MTMR1Q13613 665 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 NFKBIBQ15653 356 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GRIK4Q16099 956 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 SGO2Q562F6 1265 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GORABQ5T7V8 394 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 IQSEC1Q6DN90 963 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 PPP4R4Q6NUP7 873 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 CDPF1Q6NVV7 123 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 ZCCHC8Q6NZY4 707 aaKnown RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 PAOXQ6QHF9 649 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 KCNT2Q6UVM3 1135 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 ARHGAP27Q6ZUM4 889 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 LHFPL2Q6ZUX7 228 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 TMC3Q7Z5M5 1100 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 C11orf74Q86VG3 221 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 KSR1Q8IVT5 923 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 CHPFQ8IZ52 775 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GSTCDQ8NEC7 633 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GIMAP7Q8NHV1 300 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 COG1Q8WTW3 980 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 DCAF4Q8WV16 495 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 SCLYQ96I15 445 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 YIPF4Q9BSR8 244 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 PHF20Q9BVI0 1012 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 CCDC8Q9H0W5 538 aaPredicted RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GSX1Q9H4S2 264 aaPredicted RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 MYH16Q9H6N6 1097 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 IFT22Q9H7X7 185 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 CABP5Q9NP86 173 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 GPRC5CQ9NQ84 441 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 CYP26B1Q9NR63 512 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 SLC52A1Q9NWF4 448 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 NOP53Q9NZM5 478 aaKnown RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 NOB1Q9ULX3 412 aaKnown RBP3.04□□□□□ -1.92
GABPB1-209ENST00000559100 PCDHA8Q9Y5H6 950 aa3.04□□□□□ -1.92
GABPB1-209ENST00000559100 FAM95CA0A1B0GW59 222 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 SHTN1A0MZ66 631 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 C2orf71A6NGG8 1288 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 GNAT3A8MTJ3 354 aa3.03□□□□□ -1.92
GABPB1-209ENST00000559100 FAM155AB1AL88 458 aaPredicted RBP3.03□□□□□ -1.92
GABPB1-209ENST00000559100 NEMP1O14524 444 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms