RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, human

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF111-204	ENST00000559077	TLR7	Q9NYK1	1049 aa	Known RBP	10.04	□□□□□ -0.8
RNF111-204	ENST00000559077	SNED1	Q8TER0	1413 aa		10.04	□□□□□ -0.8
RNF111-204	ENST00000559077	IRS2	Q9Y4H2	1338 aa		10.04	□□□□□ -0.8
RNF111-204	ENST00000559077	SLX4	Q8IY92	1834 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	ARFGEF1	Q9Y6D6	1849 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	DEAF1	O75398	565 aa	Predicted RBP	10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	TGFB1	P01137	390 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	EIF2AK2	P19525	551 aa	Known RBP	10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	TAF1	P21675	1872 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	ADORA1	P30542	326 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	PHKA1	P46020	1223 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	ARSD	P51689	593 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	KIAA2012	Q0VF49	1180 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	GRIK5	Q16478	980 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	OCLN	Q16625	522 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	C11orf91	Q3C1V1	193 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	HFE2	Q6ZVN8	426 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	DHX32	Q7L7V1	743 aa	Known RBP	10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	TDRD7	Q8NHU6	1098 aa	Known RBP	10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	RILPL2	Q969X0	211 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	VTI1A	Q96AJ9	217 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	IFT43	Q96FT9	208 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	FSD1	Q9BTV5	496 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	MRPL18	Q9H0U6	180 aa	Known RBP	10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	BOLA2	Q9H3K6	86 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	MAST3	O60307	1309 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	FAM205A	Q6ZU69	1335 aa		10.03	□□□□□ -0.8
RNF111-204	ENST00000559077	COL4A1	P02462	1669 aa		10.02	□□□□□ -0.8
RNF111-204	ENST00000559077	AK9	Q5TCS8	1911 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	ZBTB42	B2RXF5	422 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	GSC2	O15499	205 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	PRMT3	O60678	531 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	TARS	P26639	723 aa	Known RBP	10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	MCAM	P43121	646 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	GSTO1	P78417	241 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	RASGRF1	Q13972	1273 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	COX20	Q5RI15	118 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	LCE1D	Q5T752	114 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	DNAJC2	Q99543	621 aa	Known RBP	10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	BCL11A	Q9H165	835 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	TAOK3	Q9H2K8	898 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	CD209	Q9NNX6	404 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	HMG20B	Q9P0W2	317 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	POLL	Q9UGP5	575 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	MYO3B	Q8WXR4	1341 aa		10.02	□□□□□ -0.81
RNF111-204	ENST00000559077	GOLIM4	O00461	696 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	DLL1	O00548	723 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	SASH3	O75995	380 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	MED26	O95402	600 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	GYG1	P46976	350 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	UBE3C	Q15386	1083 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	BACH2	Q9BYV9	841 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	HELLS	Q9NRZ9	838 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	RAX	Q9Y2V3	346 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	CACNA1S	Q13698	1873 aa		10.01	□□□□□ -0.81
RNF111-204	ENST00000559077	MYH13	Q9UKX3	1938 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	PPIP5K2	O43314	1243 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	MAP3K6	O95382	1288 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	MAP4K4	O95819	1239 aa	Predicted RBP	10	□□□□□ -0.81
RNF111-204	ENST00000559077	IGLV1-40	P01703	118 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	LDHC	P07864	332 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	RARA	P10276	462 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	CHML	P26374	656 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	ZAP70	P43403	619 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	FAM26D	Q5JW98	314 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	STRIP1	Q5VSL9	837 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	TSHZ3	Q63HK5	1081 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	CAPN12	Q6ZSI9	719 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	KIAA1211	Q6ZU35	1233 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	JDP2	Q8WYK2	163 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	KRTAP4-7	Q9BYR0	210 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	SAP130	Q9H0E3	1048 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	LRP2BP	Q9P2M1	347 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	STOML1	Q9UBI4	398 aa		10	□□□□□ -0.81
RNF111-204	ENST00000559077	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10	□□□□□ -0.81
RNF111-204	ENST00000559077	AKAP11	Q9UKA4	1901 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	ARID1B	Q8NFD5	2236 aa	Predicted RBP	9.99	□□□□□ -0.81
RNF111-204	ENST00000559077		F8W735	103 aa	Predicted RBP	9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	RNF113A	O15541	343 aa	Known RBP	9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	CYP2E1	P05181	493 aa	Predicted RBP	9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	GNAT2	P19087	354 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	ELOA	Q14241	798 aa	Known RBP	9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	SWI5	Q1ZZU3	235 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	C8orf34	Q49A92	452 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	GDF6	Q6KF10	455 aa	Predicted RBP	9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	NIM1K	Q8IY84	436 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	AGGF1	Q8N302	714 aa	eCLIP	9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	APPBP2	Q92624	585 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	SYT17	Q9BSW7	474 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	MRI	Q9BWK5	157 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	FER1L6	Q2WGJ9	1857 aa		9.99	□□□□□ -0.81
RNF111-204	ENST00000559077	MAST2	Q6P0Q8	1798 aa		9.98	□□□□□ -0.81
RNF111-204	ENST00000559077	DOCK2	Q92608	1830 aa		9.98	□□□□□ -0.81
RNF111-204	ENST00000559077	ECE2	O60344	883 aa		9.98	□□□□□ -0.81
RNF111-204	ENST00000559077	GRIN3B	O60391	1043 aa		9.98	□□□□□ -0.81
RNF111-204	ENST00000559077	IDH1	O75874	414 aa	Known RBP	9.98	□□□□□ -0.81
RNF111-204	ENST00000559077	LDHB	P07195	334 aa	Known RBP	9.98	□□□□□ -0.81
RNF111-204	ENST00000559077	MCC	P23508	829 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms