RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 USP50Q70EL3 339 aaPredicted RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 CTU1Q7Z7A3 348 aaKnown RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 ATG4DQ86TL0 474 aaPredicted RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 PUS7Q96PZ0 661 aaKnown RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 SRCIN1Q9C0H9 1055 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 ZNF277Q9NRM2 450 aaPredicted RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 VIRMAQ69YN4 1812 aaKnown RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 FLT4P35916 1363 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 ST20-MTHFSA0A0A6YYL1 179 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 PAPLNO95428 1278 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 NME2P22392 152 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 MTHFSP49914 203 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 EIF6P56537 245 aaKnown RBP6.56□□□□□ -1.36
SPG21-208ENST00000558943 ZNF792Q3KQV3 632 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 PLEKHO1Q53GL0 409 aaPredicted RBP6.56□□□□□ -1.36
SPG21-208ENST00000558943 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 RTKN2Q8IZC4 609 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 RNF214Q8ND24 703 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
SPG21-208ENST00000558943 WDR89Q96FK6 387 aaPredicted RBP6.56□□□□□ -1.36
SPG21-208ENST00000558943 MASTLQ96GX5 879 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 ZNF408Q9H9D4 720 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 SAGE1Q9NXZ1 904 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 DCTN4Q9UJW0 460 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 GNEQ9Y223 722 aaKnown RBP6.56□□□□□ -1.36
SPG21-208ENST00000558943 SAMM50Q9Y512 469 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 KIF24Q5T7B8 1368 aa6.56□□□□□ -1.36
SPG21-208ENST00000558943 ARID1BQ8NFD5 2236 aaPredicted RBP6.56□□□□□ -1.36
SPG21-208ENST00000558943 MAP2P11137 1827 aaKnown RBP6.55□□□□□ -1.36
SPG21-208ENST00000558943 SOS1Q07889 1333 aaPredicted RBP6.55□□□□□ -1.36
SPG21-208ENST00000558943 TMEM265A0A087WTH1 108 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 A0A087WZG4 1122 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 SOWAHDA6NJG2 315 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 FZD9O00144 591 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 ARNTP27540 789 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 FXR1P51114 621 aaKnown RBP eCLIP6.55□□□□□ -1.36
SPG21-208ENST00000558943 FCGRTP55899 365 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 CDK5R2Q13319 367 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 TTLL4Q14679 1199 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 PKN2Q16513 984 aaKnown RBP6.55□□□□□ -1.36
SPG21-208ENST00000558943 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 DNAJC10Q8IXB1 793 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 BCO2Q9BYV7 579 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 CACNA2D2Q9NY47 1150 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 PPM1HQ9ULR3 514 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 SNX11Q9Y5W9 270 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 MON2Q7Z3U7 1717 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 TIAM2Q8IVF5 1701 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 TONSLQ96HA7 1378 aa6.55□□□□□ -1.36
SPG21-208ENST00000558943 PDE4DIPQ5VU43 2346 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 CEACAM5P06731 702 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 SRGNP10124 158 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 CANXP27824 592 aaKnown RBP6.54□□□□□ -1.36
SPG21-208ENST00000558943 IARSP41252 1262 aaKnown RBP6.54□□□□□ -1.36
SPG21-208ENST00000558943 EPS15P42566 896 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 ST5P78524 1137 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 ZC3H12AQ5D1E8 599 aaKnown RBP6.54□□□□□ -1.36
SPG21-208ENST00000558943 C1orf141Q5JVX7 400 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 PRR5LQ6MZQ0 368 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 TMC7Q7Z402 723 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 SPRED2Q7Z698 418 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 NPM2Q86SE8 214 aaKnown RBP6.54□□□□□ -1.36
SPG21-208ENST00000558943 SYNE4Q8N205 404 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 FBF1Q8TES7 1133 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 KCNB2Q92953 911 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 HRASLS5Q96KN8 279 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 DUSP23Q9BVJ7 150 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 CEP44Q9C0F1 390 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 RNF186Q9NXI6 227 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 HDAC9Q9UKV0 1011 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 CARMIL3Q8ND23 1372 aa6.54□□□□□ -1.36
SPG21-208ENST00000558943 WASHC2AQ641Q2 1341 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 GIPC1O14908 333 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
SPG21-208ENST00000558943 C8AP07357 584 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 CYP19A1P11511 503 aaPredicted RBP6.53□□□□□ -1.36
SPG21-208ENST00000558943 ZNF157P51786 506 aaPredicted RBP6.53□□□□□ -1.36
SPG21-208ENST00000558943 OXCT1P55809 520 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 HUNKP57058 714 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 JAG1P78504 1218 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 KIF23Q02241 960 aaPredicted RBP6.53□□□□□ -1.36
SPG21-208ENST00000558943 ZNF252P-AS1Q0IIN9 211 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 AMOTQ4VCS5 1084 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 TBC1D9BQ66K14 1250 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 ZNF530Q6P9A1 599 aaPredicted RBP6.53□□□□□ -1.36
SPG21-208ENST00000558943 PLD6Q8N2A8 252 aaKnown RBP6.53□□□□□ -1.36
SPG21-208ENST00000558943 CNBD1Q8NA66 436 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 RETREG2Q8NC44 543 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 ZC3H12CQ9C0D7 883 aaKnown RBP6.53□□□□□ -1.36
SPG21-208ENST00000558943 TNKS2Q9H2K2 1166 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 GTF2IRD1Q9UHL9 959 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 ITGB4P16144 1822 aa6.53□□□□□ -1.36
SPG21-208ENST00000558943 IGF2BP3O00425 579 aaKnown RBP eCLIP6.52□□□□□ -1.37
SPG21-208ENST00000558943 CD8BP10966 210 aa6.52□□□□□ -1.37
SPG21-208ENST00000558943 HCLS1P14317 486 aaPredicted RBP6.52□□□□□ -1.37
SPG21-208ENST00000558943 NPR1P16066 1061 aa6.52□□□□□ -1.37
SPG21-208ENST00000558943 GSTT1P30711 240 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms