RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 TLE2Q04725 743 aa17.74■□□□□ 0.43
SMAD6-203ENST00000558937 IMMTQ16891 758 aaKnown RBP17.74■□□□□ 0.43
SMAD6-203ENST00000558937 DGKHQ86XP1 1220 aa17.74■□□□□ 0.43
SMAD6-203ENST00000558937 UPF3AQ9H1J1 476 aaKnown RBP17.74■□□□□ 0.43
SMAD6-203ENST00000558937 CTNNA3Q9UI47 895 aa17.74■□□□□ 0.43
SMAD6-203ENST00000558937 DDX49Q9Y6V7 483 aaKnown RBP17.74■□□□□ 0.43
SMAD6-203ENST00000558937 RAD50Q92878 1312 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 NFIBO00712 420 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 CST5P28325 142 aaPredicted RBP17.73■□□□□ 0.43
SMAD6-203ENST00000558937 ACLYP53396 1101 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 LRIT3Q3SXY7 679 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 CCSAPQ6IQ19 270 aaPredicted RBP17.73■□□□□ 0.43
SMAD6-203ENST00000558937 SH3RF1Q7Z6J0 888 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 STARD7Q9NQZ5 370 aa17.73■□□□□ 0.43
SMAD6-203ENST00000558937 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.72■□□□□ 0.43
SMAD6-203ENST00000558937 MOXD2PA6NHM9 499 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 C6orf222P0C671 652 aaPredicted RBP17.72■□□□□ 0.43
SMAD6-203ENST00000558937 GOLGA8HP0CJ92 632 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 GJA9P57773 515 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 KCNA10Q16322 511 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 PURBQ96QR8 312 aaKnown RBP17.72■□□□□ 0.43
SMAD6-203ENST00000558937 ZSCAN10Q96SZ4 725 aaPredicted RBP17.72■□□□□ 0.43
SMAD6-203ENST00000558937 SPC25Q9HBM1 224 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 TNKSO95271 1327 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
SMAD6-203ENST00000558937 TRIM43BA6NCK2 446 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 PQBP1O60828 265 aaKnown RBP17.71■□□□□ 0.43
SMAD6-203ENST00000558937 CLTBP09497 229 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 BAATQ14032 418 aaPredicted RBP17.71■□□□□ 0.43
SMAD6-203ENST00000558937 GPATCH4Q5T3I0 446 aaKnown RBP17.71■□□□□ 0.43
SMAD6-203ENST00000558937 ENAHQ8N8S7 591 aaPredicted RBP17.71■□□□□ 0.43
SMAD6-203ENST00000558937 NUP133Q8WUM0 1156 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 ANKS1AQ92625 1134 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 TRIM43Q96BQ3 446 aaPredicted RBP17.71■□□□□ 0.43
SMAD6-203ENST00000558937 KRT23Q9C075 422 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 CPVLQ9H3G5 476 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
SMAD6-203ENST00000558937 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 CTAGE5O15320 804 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 CHMLP26374 656 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 ALDH5A1P51649 535 aaPredicted RBP17.7■□□□□ 0.42
SMAD6-203ENST00000558937 TNFAIP2Q03169 654 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 SLC30A10Q6XR72 485 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 EEPD1Q7L9B9 569 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 FBXO16Q8IX29 292 aaPredicted RBP17.7■□□□□ 0.42
SMAD6-203ENST00000558937 PCSK9Q8NBP7 692 aaKnown RBP17.7■□□□□ 0.42
SMAD6-203ENST00000558937 MORC4Q8TE76 937 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 BADQ92934 168 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 UBA5Q9GZZ9 404 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 CNNM2Q9H8M5 875 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
SMAD6-203ENST00000558937 ASGR1P07306 291 aa17.69■□□□□ 0.42
SMAD6-203ENST00000558937 NKX3-2P78367 333 aa17.69■□□□□ 0.42
SMAD6-203ENST00000558937 NOL8Q76FK4 1167 aaKnown RBP17.69■□□□□ 0.42
SMAD6-203ENST00000558937 TLK2Q86UE8 772 aa17.69■□□□□ 0.42
SMAD6-203ENST00000558937 GLT1D1Q96MS3 346 aa17.69■□□□□ 0.42
SMAD6-203ENST00000558937 VTA1Q9NP79 307 aa17.69■□□□□ 0.42
SMAD6-203ENST00000558937 PDGFCQ9NRA1 345 aa17.69■□□□□ 0.42
SMAD6-203ENST00000558937 ADD3Q9UEY8 706 aaKnown RBP17.69■□□□□ 0.42
SMAD6-203ENST00000558937 GNEQ9Y223 722 aaKnown RBP17.69■□□□□ 0.42
SMAD6-203ENST00000558937 MYH6P13533 1939 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 KIAA0355O15063 1070 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 SMPD1P17405 629 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 PTGS1P23219 599 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 ITGB8P26012 769 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 CALML3P27482 149 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 BEX3Q00994 111 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
SMAD6-203ENST00000558937 ASPRV1Q53RT3 343 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 GPR153Q6NV75 609 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 TAPT1Q6NXT6 567 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 RUFY2Q8WXA3 655 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 UBAC1Q9BSL1 405 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 ELP1O95163 1332 aa17.68■□□□□ 0.42
SMAD6-203ENST00000558937 LOC102724159A0A0B4J2E5 919 aa17.67■□□□□ 0.42
SMAD6-203ENST00000558937 PTH1RQ03431 593 aa17.67■□□□□ 0.42
SMAD6-203ENST00000558937 PWP2Q15269 919 aaKnown RBP17.67■□□□□ 0.42
SMAD6-203ENST00000558937 USH1GQ495M9 461 aa17.67■□□□□ 0.42
SMAD6-203ENST00000558937 CYB5R4Q7L1T6 521 aa17.67■□□□□ 0.42
SMAD6-203ENST00000558937 TOX2Q96NM4 488 aa17.67■□□□□ 0.42
SMAD6-203ENST00000558937 A0A0U1RQG5 324 aaPredicted RBP17.66■□□□□ 0.42
SMAD6-203ENST00000558937 DCDC2CA8MYV0 355 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 CYP21A2P08686 494 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 PARP1P09874 1014 aaKnown RBP17.66■□□□□ 0.42
SMAD6-203ENST00000558937 RPS6P62753 249 aaKnown RBP17.66■□□□□ 0.42
SMAD6-203ENST00000558937 FAAP100Q0VG06 881 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 SEC23AQ15436 765 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 SHHQ15465 462 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 C9orf50Q5SZB4 431 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
SMAD6-203ENST00000558937 IFIT1BQ5T764 474 aaKnown RBP17.66■□□□□ 0.42
SMAD6-203ENST00000558937 IQSEC1Q6DN90 963 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms