RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 COL11A1P12107 1806 aaPredicted RBP14.12□□□□□ -0.15
TPM1-216ENST00000558910 STRNO43815 780 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 FGRP09769 529 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 CHST3Q7LGC8 479 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 ANKRD35Q8N283 1001 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 TRPV1Q8NER1 839 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 GMCL1Q96IK5 515 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 SLC38A10Q9HBR0 1119 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 SLC5A4Q9NY91 659 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 PRR12Q9ULL5 1215 aa14.11□□□□□ -0.15
TPM1-216ENST00000558910 SGSM2O43147 1006 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 KIAA1211Q6ZU35 1233 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 FAM160B2Q86V87 743 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 IQCA1Q86XH1 822 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 DCAF4Q8WV16 495 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 MAML3Q96JK9 1138 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 ZSCAN10Q96SZ4 725 aaPredicted RBP14.1□□□□□ -0.15
TPM1-216ENST00000558910 UBAC1Q9BSL1 405 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 UBA5Q9GZZ9 404 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 KAT14Q9H8E8 782 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 ZSWIM5Q9P217 1185 aa14.1□□□□□ -0.15
TPM1-216ENST00000558910 DDX49Q9Y6V7 483 aaKnown RBP14.1□□□□□ -0.15
TPM1-216ENST00000558910 DHX16O60231 1041 aaKnown RBP14.09□□□□□ -0.15
TPM1-216ENST00000558910 TRDNQ13061 729 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 MAP3K21Q5TCX8 1036 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 SYDE2Q5VT97 1194 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 CYB5R4Q7L1T6 521 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 KRT23Q9C075 422 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 VAT1LQ9HCJ6 419 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 RNF146Q9NTX7 359 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 TCP11L1Q9NUJ3 509 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 CCPG1Q9ULG6 757 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 A0A0G2JMZ2 1700 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 TNKSO95271 1327 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 RAD50Q92878 1312 aa14.09□□□□□ -0.15
TPM1-216ENST00000558910 PARP14Q460N5 1801 aa14.08□□□□□ -0.15
TPM1-216ENST00000558910 CYP21A2P08686 494 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 HOXC6P09630 235 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 PDHBP11177 359 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 CNTN2Q02246 1040 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 MUM1L1Q5H9M0 696 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 GJC2Q5T442 439 aaPredicted RBP14.08□□□□□ -0.16
TPM1-216ENST00000558910 NSMFQ6X4W1 530 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 PNMA1Q8ND90 353 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 LENG1Q96BZ8 264 aaPredicted RBP14.08□□□□□ -0.16
TPM1-216ENST00000558910 TRERF1Q96PN7 1200 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 ANO2Q9NQ90 1003 aa14.08□□□□□ -0.16
TPM1-216ENST00000558910 ZHX1Q9UKY1 873 aaPredicted RBP14.08□□□□□ -0.16
TPM1-216ENST00000558910 RBM8AQ9Y5S9 174 aaKnown RBP14.08□□□□□ -0.16
TPM1-216ENST00000558910 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
TPM1-216ENST00000558910 TK2O00142 265 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 COPB2P35606 906 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 ZNF792Q3KQV3 632 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 USH1GQ495M9 461 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
TPM1-216ENST00000558910 PRPF38BQ5VTL8 546 aaKnown RBP14.07□□□□□ -0.16
TPM1-216ENST00000558910 RALYLQ86SE5 291 aaKnown RBP14.07□□□□□ -0.16
TPM1-216ENST00000558910 ENAHQ8N8S7 591 aaPredicted RBP14.07□□□□□ -0.16
TPM1-216ENST00000558910 PURBQ96QR8 312 aaKnown RBP14.07□□□□□ -0.16
TPM1-216ENST00000558910 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 HTATIP2Q9BUP3 242 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 CNNM2Q9H8M5 875 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 DDX20Q9UHI6 824 aaKnown RBP14.07□□□□□ -0.16
TPM1-216ENST00000558910 SYNPO2Q9UMS6 1093 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 ZNF536O15090 1300 aa14.07□□□□□ -0.16
TPM1-216ENST00000558910 E7EWF7 191 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 H0YGN5 161 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
TPM1-216ENST00000558910 PCP11498 1178 aaKnown RBP14.06□□□□□ -0.16
TPM1-216ENST00000558910 CYBAP13498 195 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 ZNF543Q08ER8 600 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 OLFML2BQ68BL8 750 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 C7orf61Q8IZ16 206 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 ABRAQ8N0Z2 381 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 DDX12PQ92771 950 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 TTC14Q96N46 770 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 TINF2Q9BSI4 451 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 C11orf49Q9H6J7 331 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 ACAD9Q9H845 621 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 SENP2Q9HC62 589 aa14.06□□□□□ -0.16
TPM1-216ENST00000558910 PTPDC1A2A3K4 754 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 NOVP48745 357 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 PLCB2Q00722 1185 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 TYW1BQ6NUM6 668 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 EEPD1Q7L9B9 569 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 DGKHQ86XP1 1220 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 CHST13Q8NET6 341 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 FERMT2Q96AC1 680 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 SENP6Q9GZR1 1112 aaPredicted RBP14.05□□□□□ -0.16
TPM1-216ENST00000558910 OGDHLQ9ULD0 1010 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 ZMYND8Q9ULU4 1186 aaPredicted RBP14.05□□□□□ -0.16
TPM1-216ENST00000558910 CEP290O15078 2479 aa14.05□□□□□ -0.16
TPM1-216ENST00000558910 HRO43593 1189 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 SYN1P17600 705 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 CALML3P27482 149 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 CCDC178Q5BJE1 867 aa14.04□□□□□ -0.16
TPM1-216ENST00000558910 UBE2Q1Q7Z7E8 422 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms