RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 PALM3A6NDB9 673 aaPredicted RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 SPDYE16A6NNV3 312 aaPredicted RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 NDUFB10O96000 172 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 HERVK_113P62684 666 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 LACTBP83111 547 aaPredicted RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 ZNF543Q08ER8 600 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 NFXL1Q6ZNB6 911 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 MB21D1Q8N884 522 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 FANCBQ8NB91 859 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 REPS2Q8NFH8 660 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 CHURC1Q8WUH1 139 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 C8orf76Q96K31 380 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 TRIM47Q96LD4 638 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 PARK7Q99497 189 aaKnown RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 FEZ1Q99689 392 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 FUCA2Q9BTY2 467 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 RPAP3Q9H6T3 665 aaPredicted RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 TFIP11Q9UBB9 837 aaKnown RBP8.81□□□□□ -1
LRRC28-211ENST00000558890 FEM1BQ9UK73 627 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 GJD2Q9UKL4 321 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 PNMA3Q9UL41 463 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 ZKSCAN5Q9Y2L8 839 aa8.81□□□□□ -1
LRRC28-211ENST00000558890 GOLGA6L6A8MZA4 724 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 ATP2A1O14983 1001 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 CTAGE5O15320 804 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 CTDNEP1O95476 244 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 IGHA2P01877 340 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 TPM3P06753 285 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 PARP1P09874 1014 aaKnown RBP8.8□□□□□ -1
LRRC28-211ENST00000558890 BMP3P12645 472 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 IFNAR1P17181 557 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 LIG1P18858 919 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 SLC1A4P43007 532 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 METAP2P50579 478 aaKnown RBP eCLIP8.8□□□□□ -1
LRRC28-211ENST00000558890 STAT2P52630 851 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 OAZ1P54368 228 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 COG2Q14746 738 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 FAM110CQ1W6H9 321 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 SLFN13Q68D06 897 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 SASS6Q6UVJ0 657 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 CHST3Q7LGC8 479 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 OTOP1Q7RTM1 612 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 CTU1Q7Z7A3 348 aaKnown RBP8.8□□□□□ -1
LRRC28-211ENST00000558890 IFNLR1Q8IU57 520 aaPredicted RBP8.8□□□□□ -1
LRRC28-211ENST00000558890 SPICE1Q8N0Z3 855 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 SAMD3Q8N6K7 520 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 FAM200AQ8TCP9 573 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 CD99L2Q8TCZ2 262 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 ZKSCAN3Q9BRR0 538 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 RNF26Q9BY78 433 aaPredicted RBP8.8□□□□□ -1
LRRC28-211ENST00000558890 NCOA5Q9HCD5 579 aaKnown RBP8.8□□□□□ -1
LRRC28-211ENST00000558890 FBXO28Q9NVF7 368 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 DACT1Q9NYF0 836 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 BTBD7Q9P203 1132 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 ORC3Q9UBD5 711 aaPredicted RBP8.8□□□□□ -1
LRRC28-211ENST00000558890 USP25Q9UHP3 1055 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
LRRC28-211ENST00000558890 GOLGA8AA7E2F4 631 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 CAVIN2O95810 425 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 OSBPP22059 807 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 COPB2P35606 906 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 GCLCP48506 637 aaPredicted RBP8.79□□□□□ -1
LRRC28-211ENST00000558890 TYRO3Q06418 890 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 SF3A1Q15459 793 aaKnown RBP8.79□□□□□ -1
LRRC28-211ENST00000558890 RTN1Q16799 776 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 CHRDL2Q6WN34 429 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 TMTC3Q6ZXV5 915 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
LRRC28-211ENST00000558890 RASGRP2Q7LDG7 609 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 BRAPQ7Z569 592 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 ANKRD13CQ8N6S4 541 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 PRPF38AQ8NAV1 312 aaKnown RBP8.79□□□□□ -1
LRRC28-211ENST00000558890 WASF1Q92558 559 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 USP6NLQ92738 828 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 MTMR8Q96EF0 704 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 NUP88Q99567 741 aaPredicted RBP8.79□□□□□ -1
LRRC28-211ENST00000558890 MCOLN1Q9GZU1 580 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 RIOX1Q9H6W3 641 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 SENP2Q9HC62 589 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 HOXC10Q9NYD6 342 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 MAD2L2Q9UI95 211 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 RABGAP1Q9Y3P9 1069 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 ZNF236Q9UL36 1845 aa8.79□□□□□ -1
LRRC28-211ENST00000558890 KLRF2D3W0D1 207 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 ZNF500O60304 480 aaPredicted RBP8.78□□□□□ -1
LRRC28-211ENST00000558890 KINO60870 393 aaKnown RBP8.78□□□□□ -1
LRRC28-211ENST00000558890 ADCY5O95622 1261 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 ME1P48163 572 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 FUT2Q10981 343 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 TRIM29Q14134 588 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 STK38Q15208 465 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 NTRK3Q16288 839 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 FAM83BQ5T0W9 1011 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 RBM43Q6ZSC3 357 aaKnown RBP8.78□□□□□ -1
LRRC28-211ENST00000558890 MICU3Q86XE3 530 aa8.78□□□□□ -1
LRRC28-211ENST00000558890 CCAR1Q8IX12 1150 aaKnown RBP8.78□□□□□ -1
LRRC28-211ENST00000558890 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms