RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
MARK3-213ENST00000558611 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.5□□□□□ -0.41
MARK3-213ENST00000558611 ZSCAN1Q8NBB4 408 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 TMEM40Q8WWA1 233 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
MARK3-213ENST00000558611 AAASQ9NRG9 546 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
MARK3-213ENST00000558611 C10orf71Q711Q0 1435 aa12.49□□□□□ -0.41
MARK3-213ENST00000558611 A0A087WZG4 1122 aa12.49□□□□□ -0.41
MARK3-213ENST00000558611 GFRA2O00451 464 aa12.49□□□□□ -0.41
MARK3-213ENST00000558611 NRG2O14511 850 aaPredicted RBP12.49□□□□□ -0.41
MARK3-213ENST00000558611 C2CD2LO14523 706 aa12.49□□□□□ -0.41
MARK3-213ENST00000558611 TCEA2Q15560 299 aa12.49□□□□□ -0.41
MARK3-213ENST00000558611 C6orf15Q6UXA7 325 aaPredicted RBP12.49□□□□□ -0.41
MARK3-213ENST00000558611 ZMYM5Q9UJ78 669 aa12.49□□□□□ -0.41
MARK3-213ENST00000558611 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
MARK3-213ENST00000558611 H3BRJ5 948 aa12.48□□□□□ -0.41
MARK3-213ENST00000558611 HTR3BO95264 441 aa12.48□□□□□ -0.41
MARK3-213ENST00000558611 ADH7P40394 386 aa12.48□□□□□ -0.41
MARK3-213ENST00000558611 PCBP4P57723 403 aaKnown RBP12.48□□□□□ -0.41
MARK3-213ENST00000558611 AMPD3Q01432 767 aa12.48□□□□□ -0.41
MARK3-213ENST00000558611 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
MARK3-213ENST00000558611 NLGN2Q8NFZ4 835 aa12.48□□□□□ -0.41
MARK3-213ENST00000558611 CD2APQ9Y5K6 639 aa12.48□□□□□ -0.41
MARK3-213ENST00000558611 TACC3Q9Y6A5 838 aa12.48□□□□□ -0.41
MARK3-213ENST00000558611 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
MARK3-213ENST00000558611 CHL1O00533 1208 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 SELPP16109 830 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 EPHA1P21709 976 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
MARK3-213ENST00000558611 MASP1P48740 699 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
MARK3-213ENST00000558611 SPATC1Q76KD6 591 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 MDFIQ99750 246 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 KRT82Q9NSB4 513 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 PTCH2Q9Y6C5 1203 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
MARK3-213ENST00000558611 B2RBV5 119 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 GPR25O00155 361 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 DDR1Q08345 913 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 INTS3Q68E01 1043 aaKnown RBP12.46□□□□□ -0.41
MARK3-213ENST00000558611 NOL8Q76FK4 1167 aaKnown RBP12.46□□□□□ -0.41
MARK3-213ENST00000558611 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 GPBAR1Q8TDU6 330 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 GMIPQ9P107 970 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 KLHL42Q9P2K6 505 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 PFDN2Q9UHV9 154 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
MARK3-213ENST00000558611 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.42
MARK3-213ENST00000558611 POLRMTO00411 1230 aaKnown RBP12.45□□□□□ -0.42
MARK3-213ENST00000558611 CYP11A1P05108 521 aa12.45□□□□□ -0.42
MARK3-213ENST00000558611 ARAFP10398 606 aa12.45□□□□□ -0.42
MARK3-213ENST00000558611 ADH6P28332 368 aa12.45□□□□□ -0.42
MARK3-213ENST00000558611 TM4SF1P30408 202 aa12.45□□□□□ -0.42
MARK3-213ENST00000558611 HNRNPUQ00839 825 aaKnown RBP eCLIP12.45□□□□□ -0.42
MARK3-213ENST00000558611 NCAPHQ15003 741 aa12.45□□□□□ -0.42
MARK3-213ENST00000558611 TKFCQ3LXA3 575 aa12.45□□□□□ -0.42
MARK3-213ENST00000558611 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
MARK3-213ENST00000558611 CCDC88AQ3V6T2 1871 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 UPK3BL1B0FP48 263 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 UPK3BL2E5RIL1 263 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 ST8SIA5O15466 376 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
MARK3-213ENST00000558611 CDK8P49336 464 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
MARK3-213ENST00000558611 NFIXQ14938 502 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 LONRF2Q1L5Z9 754 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 WIPI1Q5MNZ9 446 aaPredicted RBP12.44□□□□□ -0.42
MARK3-213ENST00000558611 MRM1Q6IN84 353 aaKnown RBP12.44□□□□□ -0.42
MARK3-213ENST00000558611 ZSWIM2Q8NEG5 633 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 WNT8BQ93098 351 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 PLAAQ9Y263 795 aa12.44□□□□□ -0.42
MARK3-213ENST00000558611 ZNF853P0CG23 659 aa12.43□□□□□ -0.42
MARK3-213ENST00000558611 ARL4DP49703 201 aa12.43□□□□□ -0.42
MARK3-213ENST00000558611 GSTM4Q03013 218 aa12.43□□□□□ -0.42
MARK3-213ENST00000558611 GDF6Q6KF10 455 aaPredicted RBP12.43□□□□□ -0.42
MARK3-213ENST00000558611 HDXQ7Z353 690 aa12.43□□□□□ -0.42
MARK3-213ENST00000558611 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
MARK3-213ENST00000558611 DDX56Q9NY93 547 aaKnown RBP12.43□□□□□ -0.42
MARK3-213ENST00000558611 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
MARK3-213ENST00000558611 LAMB2P55268 1798 aa12.43□□□□□ -0.42
MARK3-213ENST00000558611 CARMIL3Q8ND23 1372 aa12.43□□□□□ -0.42
MARK3-213ENST00000558611 SBF1O95248 1867 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 GFRA3O60609 400 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 GNAI1P63096 354 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 TBC1D9BQ66K14 1250 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 HGSNATQ68CP4 663 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 PSAPL1Q6NUJ1 521 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 SV2AQ7L0J3 742 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 NANOS1Q8WY41 292 aaKnown RBP12.42□□□□□ -0.42
MARK3-213ENST00000558611 PLPPR2Q96GM1 343 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 TRIM47Q96LD4 638 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 CORO1BQ9BR76 489 aa12.42□□□□□ -0.42
MARK3-213ENST00000558611 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms