RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 GHRHRQ02643 423 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 FERMT3Q86UX7 667 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 MCF2L2Q86YR7 1114 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 TNFRSF25Q93038 417 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
VPS18-202ENST00000558474 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 CFAP45Q9UL16 551 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 CCPG1Q9ULG6 757 aa17.06■□□□□ 0.32
VPS18-202ENST00000558474 ABT1Q9ULW3 272 aaKnown RBP17.06■□□□□ 0.32
VPS18-202ENST00000558474 TRAPPC10P48553 1259 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
VPS18-202ENST00000558474 APLP1P51693 650 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 HERVK_113P62684 666 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 KRT25Q7Z3Z0 450 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
VPS18-202ENST00000558474 REXO1Q8N1G1 1221 aaKnown RBP17.05■□□□□ 0.32
VPS18-202ENST00000558474 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 P2RX7Q99572 595 aaKnown RBP17.05■□□□□ 0.32
VPS18-202ENST00000558474 TEX13BQ9BXU2 312 aa17.05■□□□□ 0.32
VPS18-202ENST00000558474 ZNF214Q9UL59 606 aaPredicted RBP17.05■□□□□ 0.32
VPS18-202ENST00000558474 KIF28PB7ZC32 967 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 BAG4O95429 457 aaKnown RBP17.04■□□□□ 0.32
VPS18-202ENST00000558474 FOSP01100 380 aaPredicted RBP17.04■□□□□ 0.32
VPS18-202ENST00000558474 SNAP25P60880 206 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 KRT85P78386 507 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 SREBF2Q12772 1141 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 AP3B2Q13367 1082 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 USH1GQ495M9 461 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
VPS18-202ENST00000558474 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
VPS18-202ENST00000558474 NOL7Q9UMY1 257 aaKnown RBP17.04■□□□□ 0.32
VPS18-202ENST00000558474 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 RABGAP1Q9Y3P9 1069 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
VPS18-202ENST00000558474 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 RASSF10A6NK89 507 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 FAM155AB1AL88 458 aaPredicted RBP17.03■□□□□ 0.32
VPS18-202ENST00000558474 PDHXO00330 501 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 GCLCP48506 637 aaPredicted RBP17.03■□□□□ 0.32
VPS18-202ENST00000558474 NR5A1Q13285 461 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
VPS18-202ENST00000558474 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 AGBL1Q96MI9 1066 aa17.03■□□□□ 0.32
VPS18-202ENST00000558474 PARK7Q99497 189 aaKnown RBP17.03■□□□□ 0.32
VPS18-202ENST00000558474 SCAND2PQ9GZW5 306 aaPredicted RBP17.03■□□□□ 0.32
VPS18-202ENST00000558474 RAVER2Q9HCJ3 691 aaKnown RBP17.03■□□□□ 0.32
VPS18-202ENST00000558474 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 MEIS2O14770 477 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 SLC25A27O95847 323 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 STAT3P40763 770 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.32
VPS18-202ENST00000558474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
VPS18-202ENST00000558474 RIOX2Q8IUF8 465 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 CHST13Q8NET6 341 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 POLR3EQ9NVU0 708 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 FBXO40Q9UH90 709 aa17.02■□□□□ 0.32
VPS18-202ENST00000558474 GCOM1H8Y6P7 765 aaPredicted RBP17.01■□□□□ 0.31
VPS18-202ENST00000558474 OPLAHO14841 1288 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 POLR2MP0CAP2 368 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 ALAS1P13196 640 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 PTMSP20962 102 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 TM4SF4P48230 202 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 HSD17B4P51659 736 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
VPS18-202ENST00000558474 SNRNP48Q6IEG0 339 aaKnown RBP17.01■□□□□ 0.31
VPS18-202ENST00000558474 TRERF1Q96PN7 1200 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 NAP1L4Q99733 375 aaKnown RBP17.01■□□□□ 0.31
VPS18-202ENST00000558474 SPATC1LQ9H0A9 340 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 MORC2Q9Y6X9 1032 aaPredicted RBP17.01■□□□□ 0.31
VPS18-202ENST00000558474 TCHHQ07283 1943 aa17.01■□□□□ 0.31
VPS18-202ENST00000558474 SMCHD1A6NHR9 2005 aa17■□□□□ 0.31
VPS18-202ENST00000558474 BMP15O95972 392 aa17■□□□□ 0.31
VPS18-202ENST00000558474 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
VPS18-202ENST00000558474 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
VPS18-202ENST00000558474 NOGQ13253 232 aa17■□□□□ 0.31
VPS18-202ENST00000558474 DEFB115Q30KQ5 88 aa17■□□□□ 0.31
VPS18-202ENST00000558474 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
VPS18-202ENST00000558474 SHCBP1Q8NEM2 672 aa17■□□□□ 0.31
VPS18-202ENST00000558474 CLEC4DQ8WXI8 215 aa17■□□□□ 0.31
VPS18-202ENST00000558474 PTPN18Q99952 460 aa17■□□□□ 0.31
VPS18-202ENST00000558474 ACAD9Q9H845 621 aa17■□□□□ 0.31
VPS18-202ENST00000558474 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
VPS18-202ENST00000558474 BIN2Q9UBW5 565 aaPredicted RBP17■□□□□ 0.31
VPS18-202ENST00000558474 CEP131Q9UPN4 1083 aa17■□□□□ 0.31
VPS18-202ENST00000558474 SPDYE3A6NKU9 549 aa16.99■□□□□ 0.31
VPS18-202ENST00000558474 CNMDO75829 334 aa16.99■□□□□ 0.31
VPS18-202ENST00000558474 YEATS4O95619 227 aa16.99■□□□□ 0.31
VPS18-202ENST00000558474 NASPP49321 788 aaPredicted RBP16.99■□□□□ 0.31
VPS18-202ENST00000558474 CCNA1P78396 465 aa16.99■□□□□ 0.31
VPS18-202ENST00000558474 IFNL1Q8IU54 200 aa16.99■□□□□ 0.31
VPS18-202ENST00000558474 FAM43AQ8N2R8 423 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms