RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 KDM1AO60341 852 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 INHBAP08476 426 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 HSPA8P11142 646 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 XRCC5P13010 732 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 CCND1P24385 295 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 NR1H3Q13133 447 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 CYLC2Q14093 348 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 CWF19L2Q2TBE0 894 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 SLC44A4Q53GD3 710 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZC3H15Q8WU90 426 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZFYVE9O95405 1425 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 SLFN14P0C7P3 912 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 PYGBP11216 843 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 KCNA4P22459 653 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 SLC39A14Q15043 492 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 C14orf93Q9H972 538 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 METTL14Q9HCE5 456 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
CSPG4P12-201ENST00000558282 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 GARSP41250 739 aaKnown RBP12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 PLTPP55058 493 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZBED6P86452 979 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 TFCP2Q12800 502 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 TCP11X2Q5H9J9 407 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 CHMP6Q96FZ7 201 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 TMOD3Q9NYL9 352 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 ANKIB1Q9P2G1 1089 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 GFAPP14136 432 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 RASSF7Q02833 373 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 NONOQ15233 471 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 SESTD1Q86VW0 696 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 NUDCD3Q8IVD9 361 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 MYOCDQ8IZQ8 938 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 NT5C3AQ9H0P0 336 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 BLZF1Q9H2G9 400 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZBTB3Q9H5J0 574 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 FAM96AQ9H5X1 160 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 CASC4Q6P4E1 433 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
CSPG4P12-201ENST00000558282 SEMA3EO15041 775 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 GPC4O75487 556 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 TEDDM1Q5T9Z0 273 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 CDKL2Q92772 493 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 ATP6V1G3Q96LB4 118 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 SH2D4AQ9H788 454 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 V9GY48 417 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 B4E1Z4 1266 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 N4BP1O75113 896 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 ESRRBO95718 433 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 EEF1B2P24534 225 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 HNRNPH1P31943 449 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 SMTNP53814 917 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 SNX29Q8TEQ0 813 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 CALR3Q96L12 384 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 EPN3Q9H201 632 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 NDE1Q9NXR1 346 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 SOWAHDA6NJG2 315 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 H0Y3Z8 333 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 EIF3HO15372 352 aaKnown RBP eCLIP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 ECEL1O95672 775 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 FBXW10Q5XX13 1052 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 JADE1Q6IE81 842 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 ZNF354CQ86Y25 554 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 THEMISQ8N1K5 641 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 TRAIPQ9BWF2 469 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 TSC22D4Q9Y3Q8 395 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 PRAG1Q86YV5 1406 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 PPP1R37O75864 691 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 IFNB1P01574 187 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 SPARCL1Q14515 664 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 ATG16L1Q676U5 607 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 LZICQ8WZA0 190 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 DHTKD1Q96HY7 919 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 NUDCD1Q96RS6 583 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 TUBGCP2Q9BSJ2 902 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 TRIM55Q9BYV6 548 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 UPF3AQ9H1J1 476 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 TBC1D23Q9NUY8 699 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
CSPG4P12-201ENST00000558282 ADGRF5Q8IZF2 1346 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 HDAC4P56524 1084 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 KIAA2013Q8IYS2 634 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 ACRBPQ8NEB7 543 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 XAGE3Q8WTP9 111 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 LZTS2Q9BRK4 669 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 NFU1Q9UMS0 254 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 DIS3Q9Y2L1 958 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 CFAP74Q9C0B2 1584 aa12.79□□□□□ -0.36
CSPG4P12-201ENST00000558282 POC1B-GALNT4F8VUJ3 575 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms