RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 RAB11FIP4Q86YS3 637 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 CCDC144CPQ8IYA2 1237 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 SRBD1Q8N5C6 995 aaKnown RBP13.96□□□□□ -0.17
CDK12-203ENST00000558240 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 SH3TC2Q8TF17 1288 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 DDX11Q96FC9 970 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 ZNF333Q96JL9 665 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 AMNQ9BXJ7 453 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 C22orf23Q9BZE7 217 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 MAF1Q9H063 256 aa13.96□□□□□ -0.17
CDK12-203ENST00000558240 UPF2Q9HAU5 1272 aaKnown RBP13.96□□□□□ -0.17
CDK12-203ENST00000558240 RBBP6Q7Z6E9 1792 aaKnown RBP13.96□□□□□ -0.18
CDK12-203ENST00000558240 PFASO15067 1338 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 ABCB11O95342 1321 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 DNAJC25-GNG10A0A024R161 153 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 GOLGA8BA8MQT2 603 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 HMGCRP04035 888 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK12-203ENST00000558240 UBXN2AP68543 259 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 ZNF792Q3KQV3 632 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 MUM1L1Q5H9M0 696 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 RGS22Q8NE09 1264 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 CLEC4DQ8WXI8 215 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 TRIB2Q92519 343 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 ZNF274Q96GC6 653 aaPredicted RBP13.95□□□□□ -0.18
CDK12-203ENST00000558240 PIGSQ96S52 555 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 A1CFQ9NQ94 594 aaKnown RBP13.95□□□□□ -0.18
CDK12-203ENST00000558240 BIN2Q9UBW5 565 aaPredicted RBP13.95□□□□□ -0.18
CDK12-203ENST00000558240 NAP1L2Q9ULW6 460 aaPredicted RBP13.95□□□□□ -0.18
CDK12-203ENST00000558240 LCTP09848 1927 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 NID2Q14112 1375 aa13.95□□□□□ -0.18
CDK12-203ENST00000558240 IGHA2P01877 340 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 INHAP05111 366 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 PGK2P07205 417 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 PDIA3P30101 505 aaKnown RBP13.94□□□□□ -0.18
CDK12-203ENST00000558240 ANKRD1Q15327 319 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 CCL14Q16627 93 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 USH1GQ495M9 461 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
CDK12-203ENST00000558240 HOMER1Q86YM7 354 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 RRP36Q96EU6 259 aaKnown RBP13.94□□□□□ -0.18
CDK12-203ENST00000558240 MAML3Q96JK9 1138 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 BACH2Q9BYV9 841 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 FAM217BQ9NTX9 383 aaPredicted RBP13.94□□□□□ -0.18
CDK12-203ENST00000558240 CYP39A1Q9NYL5 469 aa13.94□□□□□ -0.18
CDK12-203ENST00000558240 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
CDK12-203ENST00000558240 NFIBO00712 420 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 PPP1R11O60927 126 aaPredicted RBP13.93□□□□□ -0.18
CDK12-203ENST00000558240 TAL1P17542 331 aaPredicted RBP13.93□□□□□ -0.18
CDK12-203ENST00000558240 CDC27P30260 824 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 NEK4P51957 841 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 MFSD14CQ5VZR4 134 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 MCF2L2Q86YR7 1114 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 CMTR1Q8N1G2 835 aaKnown RBP13.93□□□□□ -0.18
CDK12-203ENST00000558240 MSL3Q8N5Y2 521 aaKnown RBP13.93□□□□□ -0.18
CDK12-203ENST00000558240 FAM133AQ8N9E0 248 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 FLRT1Q9NZU1 646 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 SEC63Q9UGP8 760 aaKnown RBP13.93□□□□□ -0.18
CDK12-203ENST00000558240 PCDHA1Q9Y5I3 950 aa13.93□□□□□ -0.18
CDK12-203ENST00000558240 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 ADD1P35611 737 aaKnown RBP13.92□□□□□ -0.18
CDK12-203ENST00000558240 FUT2Q10981 343 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 BAATQ14032 418 aaPredicted RBP13.92□□□□□ -0.18
CDK12-203ENST00000558240 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 MAMDC4Q6UXC1 1216 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 NSMFQ6X4W1 530 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 RNF207Q6ZRF8 634 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 CCDC82Q8N4S0 544 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 SAMD3Q8N6K7 520 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 IL27Q8NEV9 243 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 KIF2CQ99661 725 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
CDK12-203ENST00000558240 MAP3K20Q9NYL2 800 aaKnown RBP13.92□□□□□ -0.18
CDK12-203ENST00000558240 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 PTPDC1A2A3K4 754 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 CCDC85CA6NKD9 419 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
CDK12-203ENST00000558240 AK2P54819 239 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
CDK12-203ENST00000558240 GHRHRQ02643 423 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
CDK12-203ENST00000558240 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 LOC102724159A0A0B4J2E5 919 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 CCL5P13501 91 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
CDK12-203ENST00000558240 CNTN2Q02246 1040 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 CACNB2Q08289 660 aaPredicted RBP13.9□□□□□ -0.18
CDK12-203ENST00000558240 TRIM32Q13049 653 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 PWP2Q15269 919 aaKnown RBP13.9□□□□□ -0.18
CDK12-203ENST00000558240 MTFR1Q15390 333 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 NTRK3Q16288 839 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 FGD4Q96M96 766 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 TBC1D32Q96NH3 1257 aa13.9□□□□□ -0.18
CDK12-203ENST00000558240 LARP6Q9BRS8 491 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms