RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 SNCAIPQ9Y6H5 919 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 ADAMTS7Q9UKP4 1686 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 RBM47A0AV96 593 aaKnown RBP8.28□□□□□ -1.08
CLPX-202ENST00000558103 FAM170BA6NMN3 283 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 NTF4P34130 210 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 GRIK1P39086 918 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 CYP27A1Q02318 531 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 SEPT6Q14141 434 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 DUSP27Q5VZP5 1158 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
CLPX-202ENST00000558103 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLPX-202ENST00000558103 PHC3Q8NDX5 983 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 PLPPR2Q96GM1 343 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 MIR1-1HGQ9H1L0 117 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 LEMD3Q9Y2U8 911 aa8.28□□□□□ -1.08
CLPX-202ENST00000558103 MED26O95402 600 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 PHKG2P15735 406 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 SSTR4P31391 388 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 CD97P48960 835 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 ITPK1Q13572 414 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 SMIM5Q71RC9 77 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 LINC00116Q8NCU8 138 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 IGSF1Q8N6C5 1336 aa8.27□□□□□ -1.09
CLPX-202ENST00000558103 PXDNLA1KZ92 1463 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 DLEC1Q9Y238 1755 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 GFRA2O00451 464 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 PPM1GO15355 546 aaPredicted RBP8.26□□□□□ -1.09
CLPX-202ENST00000558103 CDK8P49336 464 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 TSNAXIP1Q2TAA8 658 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 ZBTB37Q5TC79 503 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
CLPX-202ENST00000558103 JARID2Q92833 1246 aaPredicted RBP8.26□□□□□ -1.09
CLPX-202ENST00000558103 TMEM74Q96NL1 305 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 TMOD3Q9NYL9 352 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 POLKQ9UBT6 870 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 KDM6AO15550 1401 aaPredicted RBP8.26□□□□□ -1.09
CLPX-202ENST00000558103 C10orf71Q711Q0 1435 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 SBF1O95248 1867 aa8.26□□□□□ -1.09
CLPX-202ENST00000558103 AFDNP55196 1824 aaKnown RBP8.25□□□□□ -1.09
CLPX-202ENST00000558103 LMNB2Q03252 620 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 CAMK2GQ13555 558 aaPredicted RBP8.25□□□□□ -1.09
CLPX-202ENST00000558103 PWP1Q13610 501 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 EIF4A2Q14240 407 aaKnown RBP8.25□□□□□ -1.09
CLPX-202ENST00000558103 ZNF765Q7L2R6 523 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 CDC37L1Q7L3B6 337 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 IFNL2Q8IZJ0 200 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 KCT2Q8NC54 265 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 ZNF507Q8TCN5 953 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 WNT10AQ9GZT5 417 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 ASAP1Q9ULH1 1129 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 UBR2Q8IWV8 1755 aa8.25□□□□□ -1.09
CLPX-202ENST00000558103 F6X3S4 739 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 PF4P02776 101 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 FOSL1P15407 271 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 HOXA10P31260 410 aaPredicted RBP8.24□□□□□ -1.09
CLPX-202ENST00000558103 GBP2P32456 591 aaPredicted RBP8.24□□□□□ -1.09
CLPX-202ENST00000558103 CYP27C1Q4G0S4 372 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 WIPI1Q5MNZ9 446 aaPredicted RBP8.24□□□□□ -1.09
CLPX-202ENST00000558103 LDLRAD1Q5T700 205 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 PCMTD2Q9NV79 361 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 TACC3Q9Y6A5 838 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 CLSPNQ9HAW4 1339 aa8.24□□□□□ -1.09
CLPX-202ENST00000558103 WDR90Q96KV7 1748 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 NRXN2Q9P2S2 1712 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 PRAMEF27A3QJZ7 478 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 KIAA1324LA8MWY0 1029 aaPredicted RBP8.23□□□□□ -1.09
CLPX-202ENST00000558103 MINDY4BA8MYZ0 360 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 CYP26A1O43174 497 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 FAM87AP0C7U9 286 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 ERMP1Q7Z2K6 904 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 PCNTO95613 3336 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 TNRC6CQ9HCJ0 1690 aaKnown RBP8.23□□□□□ -1.09
CLPX-202ENST00000558103 CNTNAP4Q9C0A0 1308 aa8.23□□□□□ -1.09
CLPX-202ENST00000558103 CCDC88AQ3V6T2 1871 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 MRC1P22897 1456 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 MMP10P09238 476 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 RPL6Q02878 288 aaKnown RBP8.22□□□□□ -1.09
CLPX-202ENST00000558103 DIEXFQ68CQ4 756 aaKnown RBP8.22□□□□□ -1.09
CLPX-202ENST00000558103 DTX1Q86Y01 620 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 TMEM87AQ8NBN3 555 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 RHOVQ96L33 236 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 DUSP23Q9BVJ7 150 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 BACH2Q9BYV9 841 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 COPRSQ9NQ92 184 aa8.22□□□□□ -1.09
CLPX-202ENST00000558103 SIPA1L3O60292 1781 aaPredicted RBP8.22□□□□□ -1.09
CLPX-202ENST00000558103 FAM221AA4D161 298 aa8.21□□□□□ -1.1
CLPX-202ENST00000558103 LEFTY1O75610 366 aa8.21□□□□□ -1.1
CLPX-202ENST00000558103 ETF1P62495 437 aaKnown RBP8.21□□□□□ -1.1
CLPX-202ENST00000558103 BNC2Q6ZN30 1099 aaPredicted RBP8.21□□□□□ -1.1
CLPX-202ENST00000558103 RGS22Q8NE09 1264 aa8.21□□□□□ -1.1
CLPX-202ENST00000558103 KBTBD4Q9NVX7 518 aa8.21□□□□□ -1.1
CLPX-202ENST00000558103 TIAM2Q8IVF5 1701 aa8.2□□□□□ -1.1
CLPX-202ENST00000558103 CILPO75339 1184 aa8.2□□□□□ -1.1
CLPX-202ENST00000558103 HSP90AB1P08238 724 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms