RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 CHST13Q8NET6 341 aa24.57■■□□□ 1.52
CASC4-204ENST00000557945 SNX21Q969T3 373 aa24.57■■□□□ 1.52
CASC4-204ENST00000557945 COA7Q96BR5 231 aa24.57■■□□□ 1.52
CASC4-204ENST00000557945 CTGFP29279 349 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 GPR142Q7Z601 462 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 PLEKHH3Q7Z736 793 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 HSCBQ8IWL3 235 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 TRIM47Q96LD4 638 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 ACAD9Q9H845 621 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 FBXO40Q9UH90 709 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 IVNS1ABPQ9Y6Y0 642 aa24.56■■□□□ 1.52
CASC4-204ENST00000557945 MYH6P13533 1939 aa24.55■■□□□ 1.52
CASC4-204ENST00000557945 PTPDC1A2A3K4 754 aa24.55■■□□□ 1.52
CASC4-204ENST00000557945 PFKFB3Q16875 520 aaPredicted RBP24.55■■□□□ 1.52
CASC4-204ENST00000557945 MUM1L1Q5H9M0 696 aa24.55■■□□□ 1.52
CASC4-204ENST00000557945 NSUN7Q8NE18 718 aaKnown RBP24.55■■□□□ 1.52
CASC4-204ENST00000557945 GPKOWQ92917 476 aaPredicted RBP eCLIP24.55■■□□□ 1.52
CASC4-204ENST00000557945 MRPL11Q9Y3B7 192 aaKnown RBP24.55■■□□□ 1.52
CASC4-204ENST00000557945 K7ELQ4 463 aaPredicted RBP24.54■■□□□ 1.52
CASC4-204ENST00000557945 JAK2O60674 1132 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 FCER1AP12319 257 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 SCG2P13521 617 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 ARHGEF6Q15052 776 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 DDX11Q96FC9 970 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 MMP19Q99542 508 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 DEXIO95424 95 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 CAP1Q01518 475 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 PKN1Q16512 942 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 WWC2Q6AWC2 1192 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 ANKRD35Q8N283 1001 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 CLEC4DQ8WXI8 215 aa24.54■■□□□ 1.52
CASC4-204ENST00000557945 LLPHQ9BRT6 129 aaKnown RBP24.54■■□□□ 1.52
CASC4-204ENST00000557945 ORC3Q9UBD5 711 aaPredicted RBP24.54■■□□□ 1.52
CASC4-204ENST00000557945 STK36Q9NRP7 1315 aa24.53■■□□□ 1.52
CASC4-204ENST00000557945 NFIBO00712 420 aa24.53■■□□□ 1.52
CASC4-204ENST00000557945 PTPREP23469 700 aa24.53■■□□□ 1.52
CASC4-204ENST00000557945 KCTD2Q14681 263 aa24.53■■□□□ 1.52
CASC4-204ENST00000557945 NSMFQ6X4W1 530 aa24.53■■□□□ 1.52
CASC4-204ENST00000557945 SMCHD1A6NHR9 2005 aa24.52■■□□□ 1.52
CASC4-204ENST00000557945 STRNO43815 780 aa24.52■■□□□ 1.52
CASC4-204ENST00000557945 NAPAP54920 295 aa24.52■■□□□ 1.52
CASC4-204ENST00000557945 SLC15A5A6NIM6 579 aa24.51■■□□□ 1.51
CASC4-204ENST00000557945 hCG_1984214I3L0E3 225 aa24.51■■□□□ 1.51
CASC4-204ENST00000557945 STXBP3O00186 592 aa24.51■■□□□ 1.51
CASC4-204ENST00000557945 HOXD10P28358 340 aa24.51■■□□□ 1.51
CASC4-204ENST00000557945 MCF2L2Q86YR7 1114 aa24.51■■□□□ 1.51
CASC4-204ENST00000557945 ZNF713Q8N859 430 aaPredicted RBP24.51■■□□□ 1.51
CASC4-204ENST00000557945 BARHL2Q9NY43 387 aa24.51■■□□□ 1.51
CASC4-204ENST00000557945 ZSWIM8A7E2V4 1837 aa24.51■■□□□ 1.51
CASC4-204ENST00000557945 ADORA2AP29274 412 aa24.5■■□□□ 1.51
CASC4-204ENST00000557945 ABRAQ8N0Z2 381 aa24.5■■□□□ 1.51
CASC4-204ENST00000557945 WASF1Q92558 559 aa24.5■■□□□ 1.51
CASC4-204ENST00000557945 AIFM3Q96NN9 605 aa24.5■■□□□ 1.51
CASC4-204ENST00000557945 NUDT12Q9BQG2 462 aa24.5■■□□□ 1.51
CASC4-204ENST00000557945 A1CFQ9NQ94 594 aaKnown RBP24.5■■□□□ 1.51
CASC4-204ENST00000557945 TRIM17Q9Y577 477 aa24.5■■□□□ 1.51
CASC4-204ENST00000557945 CASP8AP2Q9UKL3 1982 aa24.5■■□□□ 1.51
CASC4-204ENST00000557945 GNRH1P01148 92 aa24.49■■□□□ 1.51
CASC4-204ENST00000557945 FDPSP14324 419 aaKnown RBP24.49■■□□□ 1.51
CASC4-204ENST00000557945 GRB14Q14449 540 aa24.49■■□□□ 1.51
CASC4-204ENST00000557945 RNF207Q6ZRF8 634 aa24.49■■□□□ 1.51
CASC4-204ENST00000557945 SMARCC2Q8TAQ2 1214 aa24.49■■□□□ 1.51
CASC4-204ENST00000557945 SOCS4Q8WXH5 440 aa24.49■■□□□ 1.51
CASC4-204ENST00000557945 VPS54Q9P1Q0 977 aa24.49■■□□□ 1.51
CASC4-204ENST00000557945 PFASO15067 1338 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 MGAMO43451 1857 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 CFBP00751 764 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 PGK2P07205 417 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 CALML3P27482 149 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 HMGN5P82970 282 aaKnown RBP24.48■■□□□ 1.51
CASC4-204ENST00000557945 PRKCZQ05513 592 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 CUL4AQ13619 759 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 BAATQ14032 418 aaPredicted RBP24.48■■□□□ 1.51
CASC4-204ENST00000557945 MORN1Q5T089 497 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 TYW1BQ6NUM6 668 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 PPP1R18Q6NYC8 613 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 OTOP1Q7RTM1 612 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 DPP9Q86TI2 863 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 FAM184AQ8NB25 1140 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 TBC1D5Q92609 795 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 ALG1Q9BT22 464 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 CYP39A1Q9NYL5 469 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 SRRDQ9UH36 339 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 GABRQQ9UN88 632 aa24.48■■□□□ 1.51
CASC4-204ENST00000557945 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.48■■□□□ 1.51
CASC4-204ENST00000557945 OPLAHO14841 1288 aa24.47■■□□□ 1.51
CASC4-204ENST00000557945 MAP2K5Q13163 448 aa24.47■■□□□ 1.51
CASC4-204ENST00000557945 SLC30A10Q6XR72 485 aa24.47■■□□□ 1.51
CASC4-204ENST00000557945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.47■■□□□ 1.51
CASC4-204ENST00000557945 RGS22Q8NE09 1264 aa24.47■■□□□ 1.51
CASC4-204ENST00000557945 CCDC12Q8WUD4 166 aaPredicted RBP24.47■■□□□ 1.51
CASC4-204ENST00000557945 PSTPIP2Q9H939 334 aa24.47■■□□□ 1.51
CASC4-204ENST00000557945 GJD2Q9UKL4 321 aa24.47■■□□□ 1.51
CASC4-204ENST00000557945 SMC3Q9UQE7 1217 aa24.47■■□□□ 1.51
CASC4-204ENST00000557945 PLXNB2O15031 1838 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 SMCO2A6NFE2 343 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 POTEB2H3BUK9 544 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 GCOM1H8Y6P7 765 aaPredicted RBP24.46■■□□□ 1.51
CASC4-204ENST00000557945 POLR2MP0CAP2 368 aa24.46■■□□□ 1.51
CASC4-204ENST00000557945 XBP1P17861 261 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms