RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 SLF1Q9BQI6 1058 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 RANBP17Q9H2T7 1088 aaKnown RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 TFIP11Q9UBB9 837 aaKnown RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 CEP131Q9UPN4 1083 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 M0R2N6 131 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 FIBPO43427 364 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 VCAM1P19320 739 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 UBE2HP62256 183 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 NR5A1Q13285 461 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 MAP1SQ66K74 1059 aaPredicted RBP11.73□□□□□ -0.53
GABRB3-212ENST00000557641 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 MYPNQ86TC9 1320 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 LEO1Q8WVC0 666 aaPredicted RBP11.73□□□□□ -0.53
GABRB3-212ENST00000557641 CUL5Q93034 780 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 OTUD5Q96G74 571 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 USP28Q96RU2 1077 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 RIC8AQ9NPQ8 531 aa11.73□□□□□ -0.53
GABRB3-212ENST00000557641 CCDC194A0A1B0GVG4 234 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 TRAK2O60296 914 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 PPP1R11O60927 126 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-212ENST00000557641 ZBED4O75132 1171 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 HMGCS2P54868 508 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 PPIL2Q13356 520 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 ORC2Q13416 577 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-212ENST00000557641 SLC39A14Q15043 492 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 STK38Q15208 465 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
GABRB3-212ENST00000557641 SAMD3Q8N6K7 520 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 C2orf69Q8N8R5 385 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 LINC00301Q8NCQ3 95 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 PROCA1Q8NCQ7 364 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-212ENST00000557641 KIFC2Q96AC6 838 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 COA7Q96BR5 231 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 TANGO6Q9C0B7 1094 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 MAF1Q9H063 256 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 RPAP3Q9H6T3 665 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-212ENST00000557641 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 FZD1Q9UP38 647 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 KCNH4Q9UQ05 1017 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
GABRB3-212ENST00000557641 ABCB11O95342 1321 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 SPTLC2O15270 562 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 PPP6R2O75170 966 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 FLOT1O75955 427 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 FOSP01100 380 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 COG2Q14746 738 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 NONOQ15233 471 aaKnown RBP eCLIP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 SF3A1Q15459 793 aaKnown RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 DLK2Q6UY11 383 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 CATSPERGQ6ZRH7 1159 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 SLC10A4Q96EP9 437 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 CHAMP1Q96JM3 812 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 NAP1L4Q99733 375 aaKnown RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 ELP3Q9H9T3 547 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 GBA2Q9HCG7 927 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 NMRK2Q9NPI5 230 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
GABRB3-212ENST00000557641 MRPL11Q9Y3B7 192 aaKnown RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 CTDP1Q9Y5B0 961 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.53
GABRB3-212ENST00000557641 ATAD5Q96QE3 1844 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 A0A0G2JLL6 359 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-212ENST00000557641 ICAM1P05362 532 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 OAZ1P54368 228 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.54
GABRB3-212ENST00000557641 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 PIK3AP1Q6ZUJ8 805 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 FASTKD5Q7L8L6 764 aaKnown RBP11.7□□□□□ -0.54
GABRB3-212ENST00000557641 PRRT2Q7Z6L0 340 aaPredicted RBP11.7□□□□□ -0.54
GABRB3-212ENST00000557641 SLC38A10Q9HBR0 1119 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 MAP3K20Q9NYL2 800 aaKnown RBP11.7□□□□□ -0.54
GABRB3-212ENST00000557641 CLIC4Q9Y696 253 aa11.7□□□□□ -0.54
GABRB3-212ENST00000557641 A0A1W2PQ27 194 aa11.69□□□□□ -0.54
GABRB3-212ENST00000557641 A0A1W2PQ64 194 aa11.69□□□□□ -0.54
GABRB3-212ENST00000557641 A0A1W2PQD8 194 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms