RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 C16orf86Q6ZW13 317 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 CPXCR1Q8N123 301 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
TRAV33-201ENST00000557514 NEK9Q8TD19 979 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 ARHGAP45Q92619 1136 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAV33-201ENST00000557514 CCDC8Q9H0W5 538 aaPredicted RBP12.51□□□□□ -0.41
TRAV33-201ENST00000557514 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
TRAV33-201ENST00000557514 Q9Y3F1 56 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 DCHS1Q96JQ0 3298 aa12.51□□□□□ -0.41
TRAV33-201ENST00000557514 TCRBV5S4A2TA0A5A2 114 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 RAD21O60216 631 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 NDUFB10O96000 172 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 IQCF3P0C7M6 154 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 ERVK-21P61565 698 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
TRAV33-201ENST00000557514 SLC9C2Q5TAH2 1124 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 C12orf60Q5U649 245 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 FAM9BQ8IZU0 186 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 PRSS33Q8NF86 280 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAV33-201ENST00000557514 MFSD14AQ96MC6 490 aa12.5□□□□□ -0.41
TRAV33-201ENST00000557514 A1CFQ9NQ94 594 aaKnown RBP12.5□□□□□ -0.41
TRAV33-201ENST00000557514 COL11A1P12107 1806 aaPredicted RBP12.5□□□□□ -0.41
TRAV33-201ENST00000557514 MYO5AQ9Y4I1 1855 aaKnown RBP12.49□□□□□ -0.41
TRAV33-201ENST00000557514 ZNF532Q9HCE3 1301 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 ASB14A6NK59 587 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 ZBED4O75132 1171 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 KCNJ6P48051 423 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 PURAQ00577 322 aaKnown RBP12.49□□□□□ -0.41
TRAV33-201ENST00000557514 TMEM63BQ5T3F8 832 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 TAPT1Q6NXT6 567 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 FBXO16Q8IX29 292 aaPredicted RBP12.49□□□□□ -0.41
TRAV33-201ENST00000557514 TGS1Q96RS0 853 aaKnown RBP12.49□□□□□ -0.41
TRAV33-201ENST00000557514 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAV33-201ENST00000557514 PDGFCQ9NRA1 345 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 ATP8A2Q9NTI2 1148 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 PRKAG3Q9UGI9 489 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 MTUS1Q9ULD2 1270 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
TRAV33-201ENST00000557514 SPTBN4Q9H254 2564 aa12.49□□□□□ -0.41
TRAV33-201ENST00000557514 ZNFX1Q9P2E3 1918 aaKnown RBP12.49□□□□□ -0.41
TRAV33-201ENST00000557514 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 F5H6K3 240 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 H3BQ06 376 aaPredicted RBP12.48□□□□□ -0.41
TRAV33-201ENST00000557514 PRKAB2O43741 272 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 SURF6O75683 361 aaKnown RBP12.48□□□□□ -0.41
TRAV33-201ENST00000557514 GJB5O95377 273 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 PTPN5P54829 565 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 KLRC3Q07444 240 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 COL19A1Q14993 1142 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 TTF1Q15361 905 aaPredicted RBP12.48□□□□□ -0.41
TRAV33-201ENST00000557514 IQSEC1Q6DN90 963 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 TMCO2Q7Z6W1 182 aaPredicted RBP12.48□□□□□ -0.41
TRAV33-201ENST00000557514 TRMT2AQ8IZ69 625 aaKnown RBP12.48□□□□□ -0.41
TRAV33-201ENST00000557514 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 ARMT1Q9H993 441 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 HOMER2Q9NSB8 354 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
TRAV33-201ENST00000557514 DDX49Q9Y6V7 483 aaKnown RBP12.48□□□□□ -0.41
TRAV33-201ENST00000557514 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 TRIM27P14373 513 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
TRAV33-201ENST00000557514 DEFB103AP81534 67 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 LRRFIP1Q32MZ4 808 aaKnown RBP12.47□□□□□ -0.41
TRAV33-201ENST00000557514 ADHFE1Q8IWW8 467 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 RAD9AQ99638 391 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 VTA1Q9NP79 307 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 CTDP1Q9Y5B0 961 aaPredicted RBP12.47□□□□□ -0.41
TRAV33-201ENST00000557514 DMDP11532 3685 aa12.47□□□□□ -0.41
TRAV33-201ENST00000557514 USP17L12C9JPN9 530 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 USP17L21D6R901 530 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 MBD4O95243 580 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 IRS1P35568 1242 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 BFSP2Q13515 415 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 GPNMBQ14956 572 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 DUSP28Q4G0W2 176 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 TIGD5Q53EQ6 642 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 HERC4Q5GLZ8 1057 aaPredicted RBP12.46□□□□□ -0.41
TRAV33-201ENST00000557514 NFRKBQ6P4R8 1299 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 RETREG2Q8NC44 543 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 MORC4Q8TE76 937 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 MTG1Q9BT17 334 aaPredicted RBP12.46□□□□□ -0.41
TRAV33-201ENST00000557514 RNF146Q9NTX7 359 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 NYAP2Q9P242 653 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 COG6Q9Y2V7 657 aa12.46□□□□□ -0.41
TRAV33-201ENST00000557514 CPT1AP50416 773 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 TCF15Q12870 199 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 NBPF20Q3BBV1 942 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
TRAV33-201ENST00000557514 AFAP1L1Q8TED9 768 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms