RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
PSEN1-223ENST00000557511 SLC27A2O14975 620 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 PEX10O60683 326 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 PARP1P09874 1014 aaKnown RBP9.73□□□□□ -0.85
PSEN1-223ENST00000557511 ELNP15502 786 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 CAPN2P17655 700 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 MCM5P33992 734 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 NOVP48745 357 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 SOX10P56693 466 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 FGD1P98174 961 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 TKFCQ3LXA3 575 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 TMEM67Q5HYA8 995 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 SYDE2Q5VT97 1194 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 CREB3L3Q68CJ9 461 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 SYNE3Q6ZMZ3 975 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 CATIPQ7Z7H3 387 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 ABRAQ8N0Z2 381 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 CHST13Q8NET6 341 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 ZNF333Q96JL9 665 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 RNF208Q9H0X6 261 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 SLC38A10Q9HBR0 1119 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 RAVER2Q9HCJ3 691 aaKnown RBP9.73□□□□□ -0.85
PSEN1-223ENST00000557511 KIAA1468Q9P260 1216 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 ADAMTS5Q9UNA0 930 aa9.73□□□□□ -0.85
PSEN1-223ENST00000557511 FRMPD2Q68DX3 1309 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-223ENST00000557511 CCDC69A6NI79 296 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 ATP2A1O14983 1001 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 HRO43593 1189 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 INHAP05111 366 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 HMGB1P09429 215 aaKnown RBP9.72□□□□□ -0.85
PSEN1-223ENST00000557511 PDHBP11177 359 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 ADORA2AP29274 412 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 CAP1Q01518 475 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 ZNF543Q08ER8 600 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 GRB14Q14449 540 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 ASPRV1Q53RT3 343 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 MORN1Q5T089 497 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 ANKRD35Q8N283 1001 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 ENAHQ8N8S7 591 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-223ENST00000557511 ANKS1AQ92625 1134 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-223ENST00000557511 TMEM87BQ96K49 555 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 MTA3Q9BTC8 594 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 HMX1Q9NP08 348 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-223ENST00000557511 RABGEF1Q9UJ41 708 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 GJD2Q9UKL4 321 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
PSEN1-223ENST00000557511 PRC1O43663 620 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 ALAS1P13196 640 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 CCL5P13501 91 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 PSMA5P28066 241 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 SLC16A2P36021 539 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 PRSS12P56730 875 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 TRAF1Q13077 416 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 NECTIN1Q15223 517 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 CYB5R4Q7L1T6 521 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 CTCFLQ8NI51 663 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-223ENST00000557511 NEK1Q96PY6 1258 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 ACAD9Q9H845 621 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 ZNF214Q9UL59 606 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-223ENST00000557511 CCPG1Q9ULG6 757 aa9.71□□□□□ -0.86
PSEN1-223ENST00000557511 GREB1LQ9C091 1923 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-223ENST00000557511 EPB41L2O43491 1005 aaKnown RBP9.7□□□□□ -0.86
PSEN1-223ENST00000557511 TFRCP02786 760 aaKnown RBP9.7□□□□□ -0.86
PSEN1-223ENST00000557511 GJB1P08034 283 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 HOXC6P09630 235 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 CALM1P0DP23 149 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 CALM2P0DP24 149 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 CALM3P0DP25 149 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 CNGA1P29973 690 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 KIF5BP33176 963 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-223ENST00000557511 TTBK2Q6IQ55 1244 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 BTNL9Q6UXG8 535 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 MB21D2Q8IYB1 491 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-223ENST00000557511 REPS2Q8NFH8 660 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 NUP133Q8WUM0 1156 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 MPHOSPH6Q99547 160 aaKnown RBP9.7□□□□□ -0.86
PSEN1-223ENST00000557511 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 RNF146Q9NTX7 359 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
PSEN1-223ENST00000557511 PFASO15067 1338 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 ICAM1P05362 532 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 SNHG28P0DPA3 235 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 GNAQP50148 359 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 MTFR1Q15390 333 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 SEC23AQ15436 765 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 LAMA4Q16363 1823 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 OLFML2BQ68BL8 750 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 STOX1Q6ZVD7 989 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 CHST3Q7LGC8 479 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 TRIB2Q92519 343 aa9.69□□□□□ -0.86
PSEN1-223ENST00000557511 USP6NLQ92738 828 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms