RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PNMA2Q9UL42 364 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 CYP46A1Q9Y6A2 500 aa12.31□□□□□ -0.44
HNRNPC-232ENST00000557442 GOLGA8BA8MQT2 603 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 ZBTB43O43298 467 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 SOX10P56693 466 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 ANAPC15P60006 121 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 TM6SF1Q9BZW5 370 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 A1CFQ9NQ94 594 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 BRPF3Q9ULD4 1205 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 PFASO15067 1338 aa12.3□□□□□ -0.44
HNRNPC-232ENST00000557442 MYH7BA7E2Y1 1941 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 NFIBO00712 420 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 ZBTB5O15062 677 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 CYTH3O43739 400 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 PLEKHA8P1O95397 391 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 CCL5P13501 91 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 GNAQP50148 359 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 TRIM32Q13049 653 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 MTFR1Q15390 333 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 RTN1Q16799 776 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 SLC35G1Q2M3R5 365 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 NSMFQ6X4W1 530 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 FANCBQ8NB91 859 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 MAML3Q96JK9 1138 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 PIGSQ96S52 555 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 ABCB11O95342 1321 aa12.29□□□□□ -0.44
HNRNPC-232ENST00000557442 DNAJC25-GNG10A0A024R161 153 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 PTPDC1A2A3K4 754 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 ZNF792Q3KQV3 632 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 MFSD14CQ5VZR4 134 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 TMTC3Q6ZXV5 915 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 CMTR1Q8N1G2 835 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 MTMR8Q96EF0 704 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 LZTS2Q9BRK4 669 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 RNF208Q9H0X6 261 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 RBM28Q9NW13 759 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 SEC63Q9UGP8 760 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 DOCK5Q9H7D0 1870 aa12.28□□□□□ -0.44
HNRNPC-232ENST00000557442 TNRC18O15417 2968 aaPredicted RBP12.27□□□□□ -0.44
HNRNPC-232ENST00000557442 MKI67P46013 3256 aaKnown RBP12.27□□□□□ -0.44
HNRNPC-232ENST00000557442 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 PPP1R11O60927 126 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 CYP2C19P33261 490 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 RCAN1P53805 252 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 TOB2Q14106 344 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 NID2Q14112 1375 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 MAP3K21Q5TCX8 1036 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 SLC30A10Q6XR72 485 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 RNF207Q6ZRF8 634 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 SRBD1Q8N5C6 995 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 CNTNAP5Q8WYK1 1306 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 RRP36Q96EU6 259 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 ALPK3Q96L96 1907 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.27□□□□□ -0.459e-29■■■■□ 21.1
HNRNPC-232ENST00000557442 HMX1Q9NP08 348 aaPredicted RBP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 PDRG1Q9NUG6 133 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 CYP39A1Q9NYL5 469 aa12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 DIS3Q9Y2L1 958 aaKnown RBP12.27□□□□□ -0.45
HNRNPC-232ENST00000557442 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 RPTORQ8N122 1335 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 PNMA6FA0A0J9YX94 578 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 POTEFA5A3E0 1075 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 CALML3P27482 149 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 SMARCA1P28370 1054 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 CNTN2Q02246 1040 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 FAM133AQ8N9E0 248 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 MRPL11Q9Y3B7 192 aaKnown RBP12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 PCDHA1Q9Y5I3 950 aa12.26□□□□□ -0.45
HNRNPC-232ENST00000557442 CCDC196A0A1B0GTZ2 297 aa12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 CYBAP13498 195 aa12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 CDC27P30260 824 aa12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 CCND3P30281 292 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 TRAF1Q13077 416 aa12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 IFFO2Q5TF58 517 aa12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 IL17RAQ96F46 866 aa12.25□□□□□ -0.45
HNRNPC-232ENST00000557442 FGD4Q96M96 766 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms